R devel - May 2012 - Problem compiling package LogicReg - make Error 255

Hello all,

I've been using the R package LogicReg, but ended up having to change a
certain parameter in the Fortran 77 code (namely, I had to change LGCntrMax
to 25 in the file slogic.f).

I am using a 64-bit Windows 7 machine.  When I tried to compile, I got the
following error:
-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+
C:\Program Files\R\R-2.14.2\bin>R CMD INSTALL --build LogicReg.tar.gz
* installing to library 'C:/Users/user/Documents/R/win-library/2.14'
* installing *source* package 'LogicReg' ...
file 'src/slogic.f' has the wrong MD5 checksum
** libs

*** arch - i386
C:/PROGRA~1/R/R-214~1.2/etc/i386/Makeconf:194: warning: overriding recipe
for
target `.m.o'
C:/PROGRA~1/R/R-214~1.2/etc/i386/Makeconf:187: warning: ignoring old recipe
for
target `.m.o'
gfortran      -O3  -mtune=core2 -c My_own_scoring.f -o My_own_scoring.o
gfortran      -O3  -mtune=core2 -c external.f -o external.o
gfortran      -O3  -mtune=core2 -c slogic.f -o slogic.o
gcc  -I"C:/PROGRA~1/R/R-214~1.2/include"          -O3 -Wall 
-std=gnu99
-mtune
ore2 -c swrite.c -o swrite.o
"zMy_own_scoring.o external.o slogic.o swrite.o" was unexpected at
this
time.
make: *** [LogicReg.dll] Error 255
ERROR: compilation failed for package 'LogicReg'
* removing 'C:/Users/user/Documents/R/win-library/2.14/LogicReg'
* restoring previous
'C:/Users/user/Documents/R/win-library/2.14/LogicReg'
-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+
Unfortunately I have several gfortran compilers installed, and I'm not sure
if this is what is giving me trouble.

Below are the values for my PATH environment variables.  I've been fiddling
around with them for hours with no luck:

-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+
PATH = C:\Program Files\Rtools\gcc-4.6.3\bin; C:\Program Files\Rtools\bin;
C:\Program Files\Rtools\perl\bin; C:\Program Files\Rtools\gcc-4.6.3\bin;
C:\Program Files\Rtools\gcc-4.6.3\bin32; C:\Program
Files\Rtools\gcc-4.6.3\i686-w64-mingw32; C:\Program
Files\Rtools\gcc-4.6.3\i686-w64-mingw32\bin; C:\Program Files\Rtools\bin;
C:\Program Files\R\R-2.14.2\bin; C:\Program Files\R\R-2.14.2\;  C:\Program
Files\R\R-2.14.2\bin; C:\Program
Files\R\R-2.14.2\bin\x64;%SystemRoot%\system32;
%SystemRoot%;%SystemRoot%\System32\Wbem;%SYSTEMROOT%\System32\WindowsPowerShell\v1.0\;C:\Program
Files\MATLAB\R2011a\runtime\win64;C:\Program
Files\MATLAB\R2011a\bin;C:\Python27;C:\Python27\DLLs;C:\Python27\Scripts;C:\Python27\Lib\site-packages\PyQt4;C:\Python27\Lib\site-packages\vtk;C:\Python27\gnuplot\binary;C:\Program
Files (x86)\pythonxy\SciTE-3.0.3.2;C:\Program Files
(x86)\pythonxy\console;C:\MinGW32-xy;C:\MinGW32-xy\bin; C:\F\G77\bin;
-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+

Please  let me know if you have any insights!  Thanks in advance.

E.D. Gutierrez

	[[alternative HTML version deleted]]

It works for us, and hence

install.packages("LogicRec")

will install the precompiled binary for you.

Best,
Uwe Ligges

On 13.05.2012 11:11, E.D. Gutierrez wrote:
> Hello all,
>
> I've been using the R package LogicReg, but ended up having to change a
> certain parameter in the Fortran 77 code (namely, I had to change LGCntrMax
> to 25 in the file slogic.f).
>
> I am using a 64-bit Windows 7 machine.  When I tried to compile, I got the
> following error:
>
-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+
> C:\Program Files\R\R-2.14.2\bin>R CMD INSTALL --build LogicReg.tar.gz
> * installing to library
'C:/Users/user/Documents/R/win-library/2.14'
> * installing *source* package 'LogicReg' ...
> file 'src/slogic.f' has the wrong MD5 checksum
> ** libs
>
> *** arch - i386
> C:/PROGRA~1/R/R-214~1.2/etc/i386/Makeconf:194: warning: overriding recipe
> for
> target `.m.o'
> C:/PROGRA~1/R/R-214~1.2/etc/i386/Makeconf:187: warning: ignoring old recipe
> for
> target `.m.o'
> gfortran      -O3  -mtune=core2 -c My_own_scoring.f -o My_own_scoring.o
> gfortran      -O3  -mtune=core2 -c external.f -o external.o
> gfortran      -O3  -mtune=core2 -c slogic.f -o slogic.o
> gcc  -I"C:/PROGRA~1/R/R-214~1.2/include"          -O3 -Wall 
-std=gnu99
> -mtune
> ore2 -c swrite.c -o swrite.o
> "zMy_own_scoring.o external.o slogic.o swrite.o" was unexpected
at this
> time.
> make: *** [LogicReg.dll] Error 255
> ERROR: compilation failed for package 'LogicReg'
> * removing 'C:/Users/user/Documents/R/win-library/2.14/LogicReg'
> * restoring previous
'C:/Users/user/Documents/R/win-library/2.14/LogicReg'
>
-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+
> Unfortunately I have several gfortran compilers installed, and I'm not
sure
> if this is what is giving me trouble.
>
> Below are the values for my PATH environment variables.  I've been
fiddling
> around with them for hours with no luck:
>
>
-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+
> PATH = C:\Program Files\Rtools\gcc-4.6.3\bin; C:\Program Files\Rtools\bin;
> C:\Program Files\Rtools\perl\bin; C:\Program Files\Rtools\gcc-4.6.3\bin;
> C:\Program Files\Rtools\gcc-4.6.3\bin32; C:\Program
> Files\Rtools\gcc-4.6.3\i686-w64-mingw32; C:\Program
> Files\Rtools\gcc-4.6.3\i686-w64-mingw32\bin; C:\Program Files\Rtools\bin;
> C:\Program Files\R\R-2.14.2\bin; C:\Program Files\R\R-2.14.2\;  C:\Program
> Files\R\R-2.14.2\bin; C:\Program
> Files\R\R-2.14.2\bin\x64;%SystemRoot%\system32;
>
%SystemRoot%;%SystemRoot%\System32\Wbem;%SYSTEMROOT%\System32\WindowsPowerShell\v1.0\;C:\Program
> Files\MATLAB\R2011a\runtime\win64;C:\Program
>
Files\MATLAB\R2011a\bin;C:\Python27;C:\Python27\DLLs;C:\Python27\Scripts;C:\Python27\Lib\site-packages\PyQt4;C:\Python27\Lib\site-packages\vtk;C:\Python27\gnuplot\binary;C:\Program
> Files (x86)\pythonxy\SciTE-3.0.3.2;C:\Program Files
> (x86)\pythonxy\console;C:\MinGW32-xy;C:\MinGW32-xy\bin; C:\F\G77\bin;
>
-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+
>
> Please  let me know if you have any insights!  Thanks in advance.
>
> E.D. Gutierrez
>
> 	[[alternative HTML version deleted]]
>
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