andre zege
2012-Apr-17 21:24 UTC
[Rd] R-2.15 compile error: fatal error: internal consistency failure
I am unable to compile R-2.15.0 source. I configured it without problems with options that i used many times before ./configure --prefix=/home/andre/R-2.15.0 --enable-byte-compiled-packages=no --with-tcltk --enable-R-shlib=yes Then when i started making it, it died while making lapack, particularly on the line gfortran -fopenmp -fpic -g -O2 -c dlapack3.f -o dlapack3.o dlapack3.f: In function ‘dsbgst’: dlapack3.f:12097: fatal error: internal consistency failure compilation terminated. make[4]: *** [dlapack3.o] Error 1 Could anyone give me a clue what is going wrong and how could i fix that? I am running Centos 5.5, in particular, the following $ more /proc/version Linux version 2.6.18-194.el5 (mockbuild@builder10.centos.org) (gcc version 4.1.2 20080704 (Red Hat 4.1.2-48)) #1 SMP Fri Apr 2 14:58:14 EDT 2010 Thanks Andre [[alternative HTML version deleted]]
Duncan Murdoch
2012-Apr-17 23:51 UTC
[Rd] R-2.15 compile error: fatal error: internal consistency failure
On 12-04-17 5:24 PM, andre zege wrote:> I am unable to compile R-2.15.0 source. I configured it without problems > with options that i used many times before > > ./configure --prefix=/home/andre/R-2.15.0 > --enable-byte-compiled-packages=no --with-tcltk --enable-R-shlib=yes > > Then when i started making it, it died while making lapack, particularly on > the line > > gfortran -fopenmp -fpic -g -O2 -c dlapack3.f -o dlapack3.o > dlapack3.f: In function ?dsbgst?: > dlapack3.f:12097: fatal error: internal consistency failure > compilation terminated. > make[4]: *** [dlapack3.o] Error 1 > > Could anyone give me a clue what is going wrong and how could i fix that? I > am running Centos 5.5, in particular, the following > > $ more /proc/version > Linux version 2.6.18-194.el5 (mockbuild at builder10.centos.org) (gcc version > 4.1.2 20080704 (Red Hat 4.1.2-48)) #1 SMP Fri Apr 2 14:58:14 EDT 2010That looks like a message from your compiler. I think gcc 4.1.2 is fairly old (Windows builds are using gcc 4.6.3). Perhaps it's time to upgrade. Duncan Murdoch
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