menke@u.arizona.edu
2005-May-19 23:24 UTC
[Rd] New R (2.1) not openable under emacs files (PR#7882)
Full_Name: Michael Menke Version: 2.1 OS: Mac OS X 3.9 Submission from: (NULL) (65.41.49.80) With the previous versions of R, I could go to any project file in Emacs and open R within that file with the file images saved. I tried at the end of April with version 2.1 and then today again with version 2.1a, and opening R within a file - such as Advantage (one of my files) is impossible. It appears to try to load R, then says: Error in dyn.load(x, as.logical(local), as.logical(now)) : unable to load shared library '/Library/Frameworks/R.framework/Resources/library/grDevices/libs/grDevices.so': dlcompat: dyld: /Library/Frameworks/R.framework/Resources/bin/exec/R version mismatch for library: /usr/local/lib/libxml2.2.dylib (compatibility version of user: 9.0.0 greater than library's version: 8.0.0) Fatal error: unable to restore saved data in .RData Process R exited abnormally with code 2 at Thu May 19 17:22:22 2005 Last time, I went back and re-loaded the old version to get it to run. Any ideas what settings need redoing? Or is back to the old version for us OS X users?
Simon Urbanek
2005-May-20 14:44 UTC
[Rd] New R (2.1) not openable under emacs files (PR#7882)
On May 19, 2005, at 5:24 PM, menke@u.arizona.edu wrote:> Error in dyn.load(x, as.logical(local), as.logical(now)) : > unable to load shared library > '/Library/Frameworks/R.framework/Resources/library/grDevices/libs/ > grDevices.so': > dlcompat: dyld: /Library/Frameworks/R.framework/Resources/bin/ > exec/R version > mismatch for library: /usr/local/lib/libxml2.2.dylib (compatibility > version of > user: 9.0.0 greater than library's version: 8.0.0)This has nothing to do with R per-se - your local libxml conflicts with the system one. This is the most common mistake - many people forget to wipe their /usr/local after upgrading. Please remove the obsolete libxml from /usr/local/lib ( sudo rm -f /usr/local/ libxml*dylib ) - since Panther (10.3 and that's a while ago) the libxml is provided with the system. Cheers, Simon
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