R devel - Mar 2005 - Writing R documentation

Greetings,

I used latex type code in my Rd files.

The pdf version using
R CMD Rd2dvi --output=PKtools.pdf --pdf --title="PKtools" PKtools man
came out quite nice.

However, my current HTML version does not tex the latex so there is
latex code in the files and looks bad.

example problem code:

AIC$_c$

or

\begin{itemize}
\item NLME:
\begin{itemize}
\item population level: identify(MM\$mm\$fitted[,1], MM\$pkdata\$conc)
\item individual level: identify(MM\$mm\$fitted[,2], MM\$pkdata\$conc)
\end{itemize}
\item NONMEM:
\begin{itemize}
\item population level: identify(NM\$pred\$PRED, NM\$pred\$CONC)
\item individual level: identify(NM\$pred\$IPRE, NM\$pred\$CONC)
\end{itemize}
\item WinBUGS:
\begin{itemize}
\item population level: identify(WB\$pred\$ppred, WB\$pred\$conc)
\item individual level: identify(WB\$pred\$ipred, WB\$pred\$conc)
\end{itemize}

Is there a way to fix this?

I tried Rdconv using --type=HTML but that did not work.

Any help you can send would be appreciated.

Thank you,
Suzette

================================Suzette Blanchard, Ph.D.
UCSD-PPRU

Suzette Blanchard wrote:
> Greetings,
> 
> I used latex type code in my Rd files.
> 
> The pdf version using
> R CMD Rd2dvi --output=PKtools.pdf --pdf --title="PKtools" PKtools
man
> came out quite nice.
> 
> However, my current HTML version does not tex the latex so there is
> latex code in the files and looks bad.
Sorry, I don't understand "HTML version does not tex the latex"?


> 
> example problem code:
> 
> AIC$_c$
> 
> or
> 
> \begin{itemize}
> \item NLME:
> \begin{itemize}
> \item population level: identify(MM\$mm\$fitted[,1], MM\$pkdata\$conc)
> \item individual level: identify(MM\$mm\$fitted[,2], MM\$pkdata\$conc)
> \end{itemize}
> \item NONMEM:
> \begin{itemize}
> \item population level: identify(NM\$pred\$PRED, NM\$pred\$CONC)
> \item individual level: identify(NM\$pred\$IPRE, NM\$pred\$CONC)
> \end{itemize}
> \item WinBUGS:
> \begin{itemize}
> \item population level: identify(WB\$pred\$ppred, WB\$pred\$conc)
> \item individual level: identify(WB\$pred\$ipred, WB\$pred\$conc)
> \end{itemize}
> 
> Is there a way to fix this?
.Rd is not .tex.

Please read the manual "Writing R Extensions". You cannot use 
mathematical environments that way. There are \eqn{} environments, if 
you really need it.

Uwe Ligges





> I tried Rdconv using --type=HTML but that did not work.
 >
> Any help you can send would be appreciated.
> 
> Thank you,
> Suzette
> 
> ================================> Suzette Blanchard, Ph.D.
> UCSD-PPRU
> 
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