Michael Young
2016-Sep-16 17:59 UTC
[R] Help modifying "aheatmap" or find a new heatmap package
I am currently using "aheatmap" which is generating heatmaps based on Pearson correlation. My data consists of RPKM values for genes from 2 groups. Each group has about 70 samples. Is there anyway that I can modify "aheatmap" so that it generates heat maps based on the actual input values (RPKM) and not Pearson correlation? I want the heatmap to show high heat for higher RPKM and cold heat for lower RPKM. If not, is there a package out there that can do this? Michael [[alternative HTML version deleted]]