similar to: Help with customizing a histogram figure

Hi all, I'm having a problem once again, trying to do something very simple. Consider the following data frame: x <- read.table(textConnection("locus1 locus2 locus3 A T C A T NA T C C A T G"), header = TRUE) closeAllConnections() I am trying to make a new data frame, replacing "A" with "A/A", "T" with "T/T", "G" with

Dear all, I have a rather complicated problem. I am trying to loop through making graphs, so that the graph-making process is fully automated. For each graph, I'd like to make sure the corresponding title is formatted properly. The titles will be a combination of a gene name and numerical position within the gene. The gene name should be italic-bold, whereas the gene position should be

In conducting studies of animal orientation and displacement, I need to produce circular histograms of angles (bearings in radians 0-2pi) where the centre of the circle indicates very few observations for a given bin of angles and outwardly concentric circles indicate greater frequencies of observations for a given bin of angles. I'd like not to have to write the function myself but I

Hi all, I am looking to fit a logistic regression using the lrm function from the Design library. I am interested in this function because I would like to obtain "pseudo-R2" values (see http://tolstoy.newcastle.edu.au/R/help/02b/1011.html). Can anyone help me with the syntax? If I fit the model using the stats library, the code looks like this: model <- glm(x$trait ~ x$PC1 +

Hello again, I was hoping one of you could help me with this problem. Consider the sample data from R: > summary(prcomp(USArrests)) Importance of components: PC1 PC2 PC3 PC4 Standard deviation 83.732 14.2124 6.4894 2.48279 Proportion of Variance 0.966 0.0278 0.0058 0.00085 Cumulative Proportion 0.966 0.9933 0.9991 1.00000 How do I access the

Hi all, I am trying to do something simple, but which is deviling me. I want to add an up-arrow to the x-axis, pointing to a specific location on the axis. I want the arrow to be as large as possible. Here is where I'm at with my code: #this part if from the ?plot example: require(stats) plot(cars) lines(lowess(cars)) #I am trying to use mtext to add the arrow... but I don't know how

hello, does anyone know how to add histograms or distributions on regression like just like quantiles regression in RGraphGallery below, a very delicate codes. Thanks alot. http://addictedtor.free.fr/graphiques/RGraphGallery.php?graph=109

I intend to draw a plot of y against x. In the background of this graph I wish to creat a histogram of the horizontal variable x. Does any expert know how to produce such a plot? [[alternative HTML version deleted]]

Dear Listserv, Here is my latest in a series of simple-seeming questions that dog me. Consider the following data: x <- read.table(textConnection("temperature probability 0.11 9.4 0 2.3 0.38 8.7 0.43 9.2 0.6 15.6 0.47 8.7 0.09 12.8 0.11 9.4 0.01 7.7 0.83 8 0.65 9.3 0.05 7.4 0.34 10.1 0.02 4.8 0.07 9.1 0.6 15.6 0.01 8.4 0.9 9.6 0.83 8 0.12 8.4 0.01 8 0 5 0.11 9.7 0.41 7.4 0.05 9.4 0.09

Hello again, How do I split a data frame into smaller, completely separate data frames (rather than separate data frames comprising a single "list")? Consider the following data, and my coding attempt: x <- read.table(textConnection("id type number indv.1 bagel 6 indv.2 bagel 1 indv.3 donuts 10 indv.4 donuts 9"), header = TRUE) closeAllConnections() x.split <-

Hallo everyone, I want to evaluate the change of the distribution for several size classes. How can i order these separate histograms with the same y-axis along a common x-axis according to their size classes. It would like it to look a bit like this (http://addictedtor.free.fr/graphiques/RGraphGallery.php?graph=109) without the quantile regression. I can produce the separate histograms, but have

Hi, in order to save space for a publication, it would be nice to have a combined scatter and density plot similar to what is shows on http://addictedtor.free.fr/graphiques/RGraphGallery.php?graph=78 I wonder if anybody perhaps has already developed code for this and is willing to share. This is the reproducible code for the histogram version obtained from the site: def.par <-

Dear All, I have a question on overlaying a filled.contour (e.g. on soil properties data) and contour (by elevation) in one graph. Both have the same z matrix dimension. I'm able to overlay both graph, but the plots dimension did not overlap well on the same plots. How can I have both filled.contour and contour on the same graph? The commands that I have written are as follows:

Hi R Users, How to use the function polygon() together with the package scatterplot3d? I am trying to color below of the curves defined for the function density(). I tried to use the site: R GRAPH GALLERY as tutorial. I tried to adapt the example of this page: [figure]: http://addictedtor.free.fr/graphiques/RGraphGallery.php?graph=30 [code]:

Does anyone have a simple explanation and example on how to add histograms or barcharts to an other graph like in the example at the R-graph gallery: http://addictedtor.free.fr/graphiques/RGraphGallery.php?graph=109 looking at the code I'not undertand very well how to add graphs in arbitrary/clever position with an adequate scale. If somebody have a simplier example with explanations it

Hi- I am trying to find a way to diffuse GIS data on a European map. I have a dataset consisting of particular locations scattered across Europe, along with magnitude and value information. I can plot these as discrete points with something like the following: "geocode" is a dataframe with four columns: LAT; LONG; MAGNITUDE;VALUE. library(maps) library(mapdata)

I've looked long and hard for this, but maybe I am missing something... There is a nice module that displays histograms reflected in the y axis, i.e. http://addictedtor.free.fr/graphiques/RGraphGallery.php?graph=136 but is it possible to reflect in the x-axis, so to have two datasets, one pointing up and one down rather than left and right? I haven't been able to find a way to plot this

Hello, I am trying to create a graphic to help me visualise data. A (very simplified) sample of the data is http://n4.nabble.com/file/n1839676/circle_data.txt circle_data.txt : Aug-07 Nov-07 Feb-08 data1 1 1.5 -1 data2 1 1.2 1.6 data3 1.3 1.4 1.8 data4 1.3

Dear Ms and Mr R, I am seeking a visually appealing presentation of 3 variables (~30 datapoints) that are correlated and that should to into the same direction. The objective is to show that they do go in the same direction and what differences there might be while also giving an idea of the values of the variables. I had done this with simple bargraphs for 6 datapoints in the past, but for

Good morning, (sorry for my english) i have some problems to put off by extimation ARIMA coefficients the ones not significatives. Exist a method to extimate only that significatives? i use the command: arima(). thanks to all Stefano [[alternative HTML version deleted]]