similar to: How to improve the "OPTIM" results

Displaying 17 results from an estimated 17 matches similar to: "How to improve the "OPTIM" results"

2008 Feb 15
1
Questions about EM algorithm
Dear all: Assume I have 3 distributions, x1, x2, and x3. x1 ~ normal(mu1, sd1) x2 ~ normal(mu2, sd2) x3 ~ normal(mu3, sd3) y1 = x1 + x2 y2 = x1 + x3 Now that the data I can observed is only y1 and y2. It is easy to estimate (mu1+m2), (mu1+mu3), (sd1^2+sd2^2) and (sd1^2+sd3^2) by EM algorithm since y1 ~ normal(mu1+mu2, sqrt(sd1^2+sd2^2)) and y2 ~ normal(mu1+mu3, sqrt(sd1^2+sd3^2)) However, I want
2010 Mar 20
2
EM algorithm in R
Please help me in writing the R code for this problem. I've been solving this for 4 days. It was hard for me to solve it. It's a simulation problem in R. The problem is My true model is a normal mixture which is given as 0.5 N(-0.8,1) + 0.5 N(0.8,1). This model has two components. I will get a random sample of size 100 from this model. I will do this 300 times. That means, I will have
2006 May 21
2
nls & fitting
Dear All, I may look ridiculous, but I am puzzled at the behavior of the nls with a fitting I am currently dealing with. My data are: x N 1 346.4102 145.428256 2 447.2136 169.530634 3 570.0877 144.081627 4 721.1103 106.363316 5 894.4272 130.390552 6 1264.9111 36.727069 7 1788.8544 52.848587 8 2449.4897 25.128742 9 3464.1016 7.531766 10 4472.1360 8.827367 11
2010 Jun 13
1
using latticeExtra plotting confidence intervals
I am wanting to plot a 95% confidence band using segplot, yet I am wanting to have groups. For example if I have males and females, and then I have them in different races, I want the racial groups in different panels. I have this minor code, completely made up but gets at what I am wanting, 4 random samples and 4 samples of confidence, I know how to get A & B into one panel and C&D in to
2009 Oct 31
1
Help me improving my code
Hi, I am new to R. My problem is with the ordered logistic model. Here is my question: Generate an order discrete variable using the variable wrwage1 = wages in first full calendar quarter after benefit application in the following way: * wage*1*Ordered *= 1 *if*0 *· wrwage*1 *< *1000 2 *if*1000 *· wrwage*1 *< *2000 3 *if*2000 *· wrwage*1 *< *3000 4 *if*3000 *· wrwage*1 *<
2008 Jan 24
2
testing coeficients of glm
Dear list, i'm trying to test if a linear combination of coefficients of glm is equal to 0. For example : class 'cl' has 3 levels (1,2,3) and 'y' is a response variable. We want to test H0: mu1 + mu2 - mu3 =0 where mu1,mu2, and mu3 are the means for each level. for me, the question is how to get the covariance matrix of the estimated parameters from glm. but perhaps there
2010 Jul 18
2
loop troubles
Hi all, I appreciate the help this list has given me before. I have a question which has been perplexing me. I have been working on doing a Bayesian calculating inserting studies sequentially after using a non-informative prior to get a meta-analysis type result. I created a function using three iterations of this, my code is below. I insert prior mean and precision (I add precision manually
2008 Jul 28
1
Mixed model question.
I continue to struggle with mixed models. The square zero version of the problem that I am trying to deal with is as follows: A number (240) of students are measured (tested; for reading comprehension) on 6 separate occasions. Initially (square zero) I want to treat the test time as a factor (with 6 levels). The students are of course ``random effects''. Later I want to look at
2008 Dec 08
1
Multivariate kernel density estimation
I would like to estimate a 95% highest density area for a multivariate parameter space (In the context of anova). Unfortunately I have only experience with univariate kernel density estimation, which is remarkebly easier :) Using Gibbs, i have sampled from a posterior distirbution of an Anova model with k means (mu) and 1 common residual variance (s2). The means are independent of eachother, but
2009 Mar 30
0
Problem in S4 object displaying from within a Java application using JRI
I am using JRI (Java R Interface) library in order to call R from within my Java application. But since the "rmu1" and "rmu2" ,see the following code, are objects of type S4 once i run the application the value of Null will be returned for both of them. On this regard, i would appreciate it if anyone can tell me how i am going to display and/ or convert these objects to Java
2008 Dec 04
0
integration within maximum likelihood
Hi: I'm trying to estimate a latent variable model in mnl discrete choice framework using R. I need to do first a uni dimensional integral within each observation (row) in the database and then sum over observations. I'm stacked in the point shown below. Apparently I have a dimensionality problem in the definition of the integral. Maybe it does not identify that what I need is only one
2012 Apr 13
1
R: Colouring phylogenetic tip labels and/or edges
Hi, I have reconstructed ancestral character states on a phylogeny using MuSSE in the diversitree package and plotted the character state probabilities as pie charts on the nodes. I would, however, like to colour the character states of my extant species, i.e. the tip labels, the same colours as my pie charts, such that all species in state 1 are e.g. blue, species in state 2 red and species in
1999 Nov 25
1
gnls
Doug, I have been attempting to learn a little bit about nlme without too much documentation except the online help. The Latex file in the nlme directory looks interesting but uses packages that I do not have so that I have not been able to read it. I have run the example from gnls to compare it with the results I get from my libraries (code below - I have not included output as it is rather
2001 Apr 19
0
lex error building on Solaris 8
I get the following error when attempting to build wine 20010326 on Solaris 8, MU3 ./tools/wineinstall ... cd `dirname winebuild/__depend__` && make depend ../../tools/makedep -I. -I. -I../../include -I../../include -C. import.c main.c parser.c relay.c res16.c res32.c spec16.c spec32.c utils.c -C. cd `dirname wmc/__depend__` && make depend ../../tools/makedep -I. -I.
2001 Feb 26
0
Problems with OpenSSH 2.5.1p1 on Solaris 8
Hi, I'm not subscribed, so keep me in cc. And thanks for having mailing-list open for posting. I had a couple of problems with OpenSSH on Solaris 8/MU3 + recent patches. 1) When I tried to use scp from any other host, sshd on Solaris host crashed with SIGSEGV. Here's the stack trace: core 'core.sshd.7637' of 7637: ./sshd -d -d -d fefb393c strncpy (ffbee074, 5, 7, 0,
2007 Oct 29
1
VGAM and vglm
Hi Folks, I wonderif someone who is familiar with the details of vglm in the VGAM package can assist me. I'm new to using it, and there doesn;t seem much in the documentation that's relevant to the question below. Say I have a vector x of 0/1 responses and another vector y of 0/1 responses, these in fact being a bivariate set of 0/1 responses equivalent to cbind(x,y). E.g.
1997 Jul 24
0
Security hole in mgetty+sendfax
-----BEGIN PGP SIGNED MESSAGE----- Hi, a security hole has been found in the auxiliary fax scripts "faxq" and "faxrunq" in the mgetty+sendfax package. It has been in there since the first day those scripts were written. Due to improper quoting in these shell scripts, it''s possible to execute code with a foreign user id, and get root access to the machine. The