similar to: Why warnings using lmer-model with family=binomial

Here it is again, hope this is more clear I am using the following data (only a small subset is given): Habitat Fungus.yield Birch 20.83829053 Birch 22.9718181 Birch 22.28216829 Birch 24.23136797 Birch 22.32147961 Birch 20.30783598 Oak 27.24047258 Oak 29.7730014 Oak 30.12608508 Oak 25.76088669 Oak 30.14750974 Hornbeam 17.05307949 Hornbeam 15.32805111 Hornbeam 18.26920177 Hornbeam 21.30987049

Hello R-listers, I'm working in an experiment that try to determine the degree of infection of different clones of a fungus and, one of the measures we use to determine these degree is the counting of antibodies in the plasma at different dilutions, in this experiment the maximum number of dilutions was eleven. I already checked for differences on the maximum concentration of the

Hi all, I'm running fedora core 5 with postfix 2.2.8 (modified rpm version) and dovecot 1.0 beta7 and dovecot-lda nighly cvs snapshot from 14-04-2006 I might need to add that amavisd-new is configured as a content-filter. I have postfix running using virtual users in an mysql database and I have setup dovecot lda in postfix like the wiki says here:

Hello, I'm trying to adjust a non linear model in which the biological response variable (ratio of germinated fungus spores) is dependent on 2 covariates (temperature and time). The response to temperature is modeled by a kind of beta function with 2 parameters (optimal and maximum temperatures) and the time function is a 2-parameter Weibull. Adjustments with nls or gnls work, but I need to

On Mon, Sep 30, 2002 at 10:48:27AM -0100, fungus wrote: > One the one hand this is a great achievement but on the > other hand normal people aren't going to figure out how > good it is because they'll never push the limits. > Who's going to set "quality 0.5" when they've got a > range from zero up to ten. This is very true. I can easily hear MP3

fungus wrote: > There are some mp3 players which can record as well. It's > just a matter of time... I've been looking for one for many months but couldn't find one with hifi quality recording/encoding. I'm about to purchase a portable Minidisc recorder for recording intervews. Ross. --- >8 ---- List archives: http://www.xiph.org/archives/ Ogg project homepage:

This problem was posted a couple years ago here: http://tolstoy.newcastle.edu.au/R/help/04/01/0231.html Using Windows XP with R 2.3.1, I am now experiencing the same problem again: when a plot is saved and/or copied as a WMF, the labels do not have the correct character spacing. I am trying to insert the WMF into a MS Word 2003 document (my first mistake, I know), but even when the WMF is

Hello R community, I am looking for a robust test for equality of variances that can take observation weights. I realize I can do the F-test with weighted variances, but I've read that this test is not very robust. So I thought about maybe adding a "weights" argument to John Fox's code for the Levene Test (in the "car" library, "levene.test"), substituting

Respected Sir/Madam, I have a question regarding calculation of LD50 (Lethal Dose) and IC50 (50% inhibitory concentration) of an antimicrobial experiment. I have used a compound isolated from a plant and observed its effect on the fungus *Fusarium oxysporum* by the food poisoning method. Solutions of the compound at concentrations of 0, 50, 100, 150, 200 and 250µg/ ml were added to

--------------------------------------------------------------------------- The following patch when applied on top of: libxl: attempt to cleanup tapdisk processes on disk backend destroy. Establishes correct cleanup behavior for blktap devices. This patch implements the release of the backend device before calling for the destruction of the userspace component of the blktap device. Without

I just had another thought on this topic. What if we have a setting to select the maximum possible bitrate instead of a target bitrate setting. This satisfies the streaming people, but means that for an ordinary user to set a bitrate he'll have to set the quality to 9.999999 *and* the maximum bitrate to whatever he wants. ie. If he sets quality to "near CD" and max_bitrate to

Dear R-Help List, I'm trying to simulate data from a conditional distribution, and haven't been able to modify my existing code to do so. I searched the archives, but didn't find any previous post that matched my question. n=10000 pop = data.frame(W1 = rbinom(n, 1, .2), W2 = runif(n, min = 3, max = 8), W3 = rnorm(n, mean=0, sd=2)) pop = transform(pop, A = rbinom(n, 1,

I realise the it's hard to do a seek in a variable bitrate file but I didn't think it was this bad. It seems to vary a lot with the file but the total time to do an ov_open() and ov_pcm_seek() can add upp to a second or more. By this time my DirectX buffers have wrapped around and are looping. Can anybody think of a solution for this? I really need a faster response time for my in-game

Hello list, I am trying to apply the paired t.test between diseased and not diseased patients to identify genes that are more expressed in the one situation under the other. In order to retrieve the genes that are more expressed in the positive disease state I do: p.values<-c() for(i in 1:length(Significant[,1])){ p.values[i]<-try(t.test(positive[i,],negative[i,],alternative

Hi all! Maybe someone could help me with the following. I know this hasn't directly to do with ecology but I'm also using glm. I have a list of 16 genes and 10 samples. The samples are of two types, 4 Ctrl and 6 Diseased. If, labelInd<-as.factor(c(rep("0",4),rep("1",6))) genes.glm<-glm(labelInd ~ ., family=binomial, data=mat) beeing "mat" the 10x16

How can I decode a Vorbis file which is in RAM (not in a file on the disk)?? (Writing it to disk isn't an option...) -- <\___/> / O O \ \_____/ FTB. --- >8 ---- List archives: http://www.xiph.org/archives/ Ogg project homepage: http://www.xiph.org/ogg/ To unsubscribe from this list, send a message to 'vorbis-request@xiph.org' containing only the word

Hi everyone, I am facing a problem I really do not know how to resolve about detecting significant spatial structures in a region I am studying. The study is about the Miombo forest (wooded savanna). I am working in a 10 ha permanent forest plot, where all trees are mapped and identified. I sampled 24 more or less regulately scattered plots of 25 x 25 m over the 10 ha. In each plot of 25 x 25 m

How To Increase Computer Speed And Performance - Great Tips & Tricks Many computer users are worried about their computer''s performance. After spending lot of bucks, still they cannot have that charm of using PC as they had expected. http://2site.com/jfhbwt How to Get Rid of Toe & Finger Nail Fungus A fungal infection of the toe or finger nails often results from a chronic

Hello, While i m trying to start my apache server i am getting following error. [Wed Apr 14 01:47:58 2010] [warn] Useless use of AllowOverride in line 31 of /home/tomcat/conf/mod_jk.conf. [Wed Apr 14 01:47:58 2010] [warn] Useless use of AllowOverride in line 36 of /home/tomcat/conf/mod_jk.conf. Please let me know if you have any solution regarding this. Thanks & Regards Manoj

I use lmer to fit a mixed effect model.It give some warnings.what does this warnings mean? and what should I do? > (fm2.mlm <- lmer(qd ~ edu + jiankang + peixun +hunyin + cadcj + age + age2 + sex + dangyuan + Comp.1 + Comp.2+trust.cz1 +(trust.cz1|commid), data = individual,na.action = "na.exclude",family="quasibinomial")) Generalized linear mixed model fit using PQL