similar to: lme4 install error

Hi folks, I want to have a y-axis using matplot where the y axis is truncated as shown schematically below: (msecs) 3000 | x ~ ~ 800 | x | | x | ----|----|----|----------------- 1 2 3 Position The ~ is supposed to stand for a curved line showing a break. The issue is that I want to plot the points shown by the

Dear R users, Many of you are aware of the statistical package lme4 used in R for carrying out mixed-effects modeling. The lme4 R-Forge website [ https://r-forge.r-project.org/projects/lme4/] is going to maintain a list of all dissertations and articles (accepted for publication, in press, or published) that use lme4 or its precursor, nlme. It would be helpful if members of this list could

Hello everybody, I'm trying to subset a data frame "foo", which looks like this: sent cond raw V1 10 2 A 614 7 11 2 A 724 6 12 2 A 641 5 13 2 A 665 9 33 5 B 510 7 34 5 B 659 7 35 5 B 607 6 37 5 B 467 8 38 5 B 586 9 39 5 B 523 10 57 8 C 858 8 58 8 C 513 9 59 8 C

Hi all, I have the following dataset, call it test.data (30 columns, and one row named "0"): ADVP ADVP AP AP CONJ CONJ CP CP DU DU INF INF MWU MWU NP NP PP PP PPRT PPRT REL REL SMN SMN SSB SSB SV1 SV1 TI TI 0 96.85 2.05 89.07 2.54 70.91 2.37 94.92 3.46 82.31 11.33 40.96 2.25 98.06 3.43 90.77 17.63 86.60 10.78 60.27 1.32 93.27 0.97 77.60

Hi all, I'm building a plot of the values in tmeant (below) against positions 1 to 5, using matplot. tmeant looks like this: case1 case2 pos1 861.8466 818.5909 pos2 961.2841 976.3466 pos3 878.6080 1262.8523 pos4 950.8011 1129.6080 pos5 968.1080 1063.3920 I also have lower (object tl) and upper (object tu) bounds on the confidence intervals as follows: tl: pos1

Hi Folks, I'm interested in looking (in a beginner's amateurish way) at prosodic/phonetic analysis of recorded speech. In particular I would want to use R to formulate and evaluate specific models. So I would like to ask R people for their recommendations for a program which would a) Take as input a sound file in one of the common formats (".wav", ".au") b)

Hi, I am trying to install the nlme package, but during installation I get the message <snip> pdSymm text html latex example plot.ACF text html latex example missing link(s): xyplot plot.Variogram text html latex example missing link(s): xyplot plot.augPred

Hi all, I'm trying to figure out the example about mixed models in the Pinheiro and Bates book (Mixed-Effects Models in S and S-Plus, 2000, pp. 135-137). One thing I don't understand is: When I run the command fm1Orth.lm <- lm( distance ~ age, Orthodont ) followed by fm2Orth.lm <- update( fm1Orth.lm, formula = distance ~ Sex*age ) and then do summary(fm2Orth.lm)

Hi, My apologies for sending this message earlier to the wrong list (next time I'll wait till I'm fully awake). I'm a new R user. I want to do the following: I want to pass a filename to R repeatedly (about 400 times) in order to do a repetitive task (calculating regressions). The way I'm setting it up is to write a bash script that will create an R source file on the fly for

While trying to install a package, I received this error ** preparing package for lazy loading Error in matchSignature(signature, fdef, where) : more elements in the method signature (2) than in the generic signature (1) A more helpful variant is Error in matchSignature(signature, fdef, where) : more elements in the method signature (2) than in the generic signature (1) for function

Hello R-Team, May you help me to post a 'S4-creating Package Problem'? Thanks already now for supporting. The problem sounds like: Hello R forum, while compiling my R-package these 'Warnings' occur: ... Warnung in matchSignature(signature, fdef, where) : in the method signature for function "plot" no definition for class: "prediction" Warnung in

In my package, I create a new method for plot with the following signature: setMethod("plot", signature(x="marrayNorm", y="formula"), plot.ma) where marrayNorm is a class defined in the marray package. After building and installing my package, I get the following warnings when I load my package (with library(maVis)): Warning messages: 1: In the method signature

Is there a method for creating "animations" using R. Or is there another piece of software (unix perferrably) that can generate a "movie" from many ps/eps/gif/jpg files? Thanks, Jeff. Jeff D. Hamann Hamann, Donald and Associates PO Box 1421 Corvallis, Oregon USA 97339-1421 Bus. 541-753-7333 Cell. 541-740-5988 jeff_hamann at hamanndonald.com www.hamanndonald.com

Hi all, I figured out some things about an earlier question I posted today; this is a new question: I have a for-loop in which I have the following lines for (i in list.files(pattern = "*.dmp")) { currentfile <- read.table(i) vecrawrts <- as.vector(currentfile$V3) ... } Now, vecrawrts is numeric, but if I run the script on all the files with extension .dmp, I get the

With > R.version.string [1] "R version 2.15.0 alpha (2012-03-14 r58748)" trying to trace a method using the 'signature' argument fails rather than enabling the trace: > trace(initialize, signature="ANY") Error in matchSignature(signature, fdef, where) : trying to match a method signature of class ?signature?; expects a list or a character vector --

I am trying to get a script to start automatically when I run the GUI version of R version 1.9.0, started from a .bat file (WINDOWS), but I'm getting strange errors In version 1.8.1 I was able to run a script automatically by copying the script into the file .Rprofile and running Rgui from a .bat script, but in version 1.9.0 I'm getting errors like: Error in inherits(x,

Hi all, Could you point me to a script editor in Linux that will allow me to a somewhat easy pasting of section(s) of an R script or function into R for execution? Something like WinEdt+RWinEdt macro in R for Windows? (My time is a bit pressed. I haven't succeeded in my attempts to install ESS for XEmacs. No doubt due to my confusion and lack of competence. I am abandoning it for the

Hi all, Could you please help me? I am trying to understand why this line works: lm1x = lm(y~X-1, tmp) Here it seems that I was combining the design matrix and the data frame... And X below is not a single column, in fact, it's a bunch of columns in matrix form... I don't understand why this line works... Is it just luck, i.e. if we change the data-set and/or formulas to something

I'm seeing weird issues in methods initialization, i.e. loading marrayClasses loads Biobase, and when explicitly done, as in library(Biobase) library(marrayClasses) is fine, but when Biobase is loaded via a require statement in marrayClasses' .First.Lib, I end up with: Warning message: In the method signature for function "coerce", class "exprSet" has no

This seemed too advanced for r-help and is related to the recent discussion of character vectors in dataframes. Following Brian Ripley's most excellent advice, we are moving to a world in which character vectors in dataframes are always of class AsIs. The cool way of doing this seemed to be the following: > cat(c("x", "y", "z"), file = "test.txt",