Displaying 20 results from an estimated 8000 matches similar to: "Passing arguments to glm()"
2010 Jun 05
1
glm output format
Hello,
I am running a loop to compare some residual deviances obtained from glm, with codes:
........
OUT<-NULL
for (i in 1:10){
myglm<-glm(mat ~X1+X2+X3,family = binomial, data =myDATA)
OUT<-c(OUT,myglm$deviance) }
.......
In the loop, X1, X2, and X3 chage with i. If X1, X2 and X3 are not highly correlated, OUT is a vector of 10 values.
The problem is: if there there is
2009 Jul 26
1
obtain names of variables and data from glm object
Suppose we have some glm object such as:
myglm <- glm( y ~ x, data=DAT)
Is there an elegant way--or the "right way" within the R way of thinking--to
obtain the names of the response variable, the predictor variables, and the
dataset, as character strings?
For instance, suppose the "right way" was to use the (currently fictitious)
functions theresponse(), thepredictors(),
2010 Dec 01
3
How to pass selection criteria in a function
Hi,
Suppose I have the following data
name score
Abel 88
Baker 54
Charlie 77
stored a table called myData.
I want to write a function that will create a table which is a subset of myData containing those have a score > 75.
I know I can do this with the following command:
subset(myData, score > 75)
But I would like to do this via a function, something like:
2006 Feb 14
2
How to handle large dataframes?
Dear all
I imported a Stata .dta file with the read.dta-function from the
foreign-package. The dataframe's dimensions are
> dim(d.apc)
[1] 15806 1300
Importing needs up to 15 min and calculations with these data are rather
slow (although I subset the data before starting analyses).
My questions are:
1. Has someone experiences importing Stata files (alternatives to
read.dta) ?
2.
2007 Jul 06
2
access to 'formula' terms in a user function
This is probably buried somewhere in the R help archives, but I've been
unable to find it, so perhaps the keywords I use here will help bring the
topic to the surface more easily for future users.
I want to write my own modeling function (ultimately for some
multidimensional windowing - but this question is on scripting basics). For
purposes of figuring out my needs, lets just consider
2006 Jan 11
1
updating formula inside function
Dear R-Helpers
Given a function like
foo <- function(data,var1,var2,var3) {
f <- formula(paste(var1,'~',paste(var2,var3,sep='+'),sep=''))
linmod <- lm(f)
return(linmod)
}
By typing
foo(mydata,'a','b','c')
I get the result of the linear model a~b+c.
How can I rewrite the function so that the formula can be updated inside
the function,
2012 Aug 01
3
Neuralnet Error
I require some help in debugging this code
library(neuralnet)
ir<-read.table(file="iris_data.txt",header=TRUE,row.names=NULL)
ir1 <- data.frame(ir[1:100,2:6])
ir2 <- data.frame(ifelse(ir1$Species=="setosa",1,ifelse(ir1$Species=="versicolor",0,"")))
colnames(ir2)<-("Output")
ir3 <- data.frame(rbind(ir1[1:4],ir2))
2006 May 31
2
a problem 'cor' function
Hi list,
One of my co-workers found this problem with 'cor' in his code and I confirm it too (see below). He's using R 2.2.1 under Win 2K and I'm using R 2.3.0 under Win XP.
===========================================
> R.Version()
$platform
[1] "i386-pc-mingw32"
$arch
[1] "i386"
$os
[1] "mingw32"
$system
[1] "i386, mingw32"
$status
2008 Oct 13
2
split data, but ensure each level of the factor is represented
Hello,
I'll use part of the iris dataset for an example of what I want to
do.
> data(iris)
> iris<-iris[1:10,1:4]
> iris
Sepal.Length Sepal.Width Petal.Length Petal.Width
1 5.1 3.5 1.4 0.2
2 4.9 3.0 1.4 0.2
3 4.7 3.2 1.3 0.2
4 4.6 3.1 1.5
2012 Jun 11
1
saving sublist lda object with save.image()
Greetings R experts,
I'm having some difficulty recovering lda objects that I've saved within sublists using the save.image() function. I am running a script that exports a variety of different information as a list, included within that list is an lda object. I then take that list and create a list of that with all the different replications I've run. Unfortunately I've been
2012 Jul 10
3
fill 0-row data.frame with 1 line of NAs
Dear all
Is there a simpler method to achieve the following: When I obtain an
empty data.frame after subsetting, I need for it to contain one line
of NAs. Here's a dummy example:
> (.xb <- iris[ iris$Species=='zz', ])
[1] Sepal.Length Sepal.Width Petal.Length Petal.Width Species
<0 rows> (or 0-length row.names)
> dim(.xb)
[1] 0 5
> (.xa <-
2012 Jul 31
1
kernlab kpca predict
Hi!
The kernlab function kpca() mentions that new observations can be transformed by using predict. Theres also an example in the documentation, but as you can see i am getting an error there (As i do with my own data). I'm not sure whats wrong at the moment. I haven't any predict functions written by myself in the workspace either. I've tested it with using the matrix version and the
2008 Feb 27
2
multiple plots per page using hist and pdf
Hello,
I am puzzled by the behavior of hist() when generating multiple plots
per page on the pdf device. In the following example two pdf files
are generated. The first results in 4 plots on one pdf page as
expected. However, the second, which swaps one of the plot() calls
for hist(), results in a 4 page pdf with one plot per page.
How might I get the histogram with 3 other scatter
2007 Mar 22
2
unexpected behavior of trellis calls inside a user-defined function
I am making a battery of levelplots and wireframes for several fitted
models. I wrote a function that takes the fitted model object as the
sole argument and produces these plots. Various strange behavior
ensued, but I have identified one very concrete issue (illustrated
below): when my figure-drawing function includes the addition of
points/lines to trellis plots, some of the
2011 Jul 28
2
not working yet: Re: lattice overlay
Hi Dieter and R community:
I tried both of these three versions with ylim as suggested, none work: I
am getting only single (pch = 16) not overlayed (pch =3) everytime.
*vs 1*
require(lattice)
xyplot(Sepal.Length ~ Sepal.Width | Species , data= iris,
panel= function(x, y, subscripts) {
panel.xyplot(x, y, pch=16, col = "green4", ylim = c(0, 10))
panel.lmline(x, y, lty=4, col =
2010 Jun 09
4
question about "mean"
Hi there:
I have a question about generating mean value of a data.frame. Take
iris data for example, if I have a data.frame looking like the following:
---------------------
Sepal.Length Sepal.Width Petal.Length Petal.Width Species
1 5.1 3.5 1.4
0.2 setosa
2 4.9 3.0 1.4
0.2
2005 Apr 27
4
How to add some of data in the first place dataset
Dear R-help,
First I apologize if my question is quite simple.
I need add some of data in the first place my dataset, how can I do that.
I have tried with rbind, but I did not succes.
0.1 3.6 0.4 0.9 rose
4.1 4.0 1.2 1.2 rose
4.4 3.2 1.9 0.5 rose
4.6 1.1 1.1 0.2 rose
For example,
2006 Dec 14
5
Nicely formatted tables
If I use latex(summary(X)) where X is a data frame with four
variables I get something like
Rainfall Education Popden Nonwhite
Min. :10.00 Min. : 9.00 Min. :1441 Min. : 0.80
1st Qu.:32.75 1st Qu.:10.40 1st Qu.:3104 1st Qu.: 4.95
Median :38.00 Median :11.05 Median :3567 Median :10.40
Mean :37.37 Mean :10.97 Mean :3866
2007 Oct 10
3
save lm output into vectors
Hi,
May I ask how I can save the coefficients and the p values into a table?
thanks.
jiong
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2009 Dec 19
3
DROP and KEEP statements in R
What is equivalent to DROP or KEEP statements of SAS in R?
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