similar to: graphing with error bars

Dear R-help, I am looking for a function that will plot error bars in x- or y-direction (or both), the same as the Gnuplot function 'plot' can achieve with: plot "file.dat" with xyerrorbars,... Rsite-searching led me to the functions 'errbar' and 'plotCI' in the Hmisc, gregmisc, and plotrix packages. As I understand the descriptions and examples, none of

Hi, I need to convert numbers to characters in order to index an array when I encountered the number 100000 which turned into "1e+05". Does anyone know how to get around this problem? Lana Schaffer Biostatistics/Informatics The Scripps Research Institute DNA Array Core Facility La Jolla, CA 92037 (858) 784-2263 (858) 784-2994 schaffer at scripps.edu

Hi, Can someone suggest an efficient way to substitute a vector/matrix which contains 1's and 0's to P's and A's (resp.)? Thanks, Lana

Dear all, Does anyone knwo how to add error bar to the data point in a simple xyplot? Right now, I have a .dat file including both the data points and their standard deviation and read it in R. I tried function arrows(). But it didn't gave me any arrows. Thanks for the help! Jeny

Hi, I am trying to compile the R-dev version on a unix Suse machine and got errors. Would someone be able to help me determine what to do to fix these errors: make[1]: Entering directory `/lustre/people/schaffer/R-devel/m4' make[1]: Nothing to be done for `R'. make[1]: Leaving directory `/lustre/people/schaffer/R-devel/m4' make[1]: Entering directory

Hi, I am using this subset statement and it works outside a function. LIS[[i]]<- lapply(LI, subset, select=cov[[i]]) However, wrapped inside a function this statement produces the same values for every LIS[[1]] which is only the first subset of LI. Does anyone know why is not working correctly inside a function? ff = factor(covariate) nLev <- nlevels(ff) cov <-

Friends, Is there a Partial Least Squares package implemented in R? Thanks, Lana [[alternative HTML version deleted]]

All Is there an R command to produce error bars around a plotted point. Crawley's book uses the command error.bar() but my version of R rejects it. Must be an S+ command(?). Thanks REX [[alternative HTML version deleted]]

How can plots (histograms) be implemented with the command line interface to R? Lana Schaffer

Hi, I want to add error bars to a plot generated with xyplot. I've tried both errbar() and plotCI(), but in both cases the points are not in the same place. It's as if the two functions are using a different frame of reference for the plotting area. for example: means <- c(92.5, 92.25, 90.9, 91.0, 94.15, 90.05) #means time <- c(1,1,2,2,3,3) #occasion variable group <-

Hi, I have the two vectors mean and sd of individual columns, but I am unsure how to generate bar charts with the standard deviation, even after looking the help of barplot and barplot.2. [[alternative HTML version deleted]]

Hi R users, 1) How does one show confidence-intervals in a barchart and use rownames for labels on the y-axes? I have looked at "plotCI" in "gregmisc" package . But it does not seem to produce something like a barchart. The statistic, error, upper-bound, and lower-bound are in a dataframe. 2) How to show CI in a barchart either using the statistic and, either (a)

I've thrown a couple of useful functions into a new package "gregmisc" and uploaded them to ftp://ftp.ci.tuwien.ac.at/incoming/gregmisc_0.1.1.tgz Here's DESCRIPTION: Package: gregmisc Description: Misc Functions written/maintained by Gregory R. Warnes Title: Greg's Miscellaneous Functions Version: 0.1 Date: 2001/05/24 Depends: R Maintainer: Gregory R. Warnes

Hi, I'm now to R and hope (actually, I'm quite sure) you can help me. I made an experiment and measured two values. As I know the errors of these values I want to use them with the linear regression, eg Value A 1.1+-0.02 1.9+-0.05 3.05+-0.03 4.0+-0.01 5.1+-0.06 Value B 4.2+-0.14 5.3+-0.05 6.8+-0.11 7.9+-0.01 8.5+-0.02 lm(B~A) does the linear regression but how can I

There was an inquiry on this list recently about plotting some simple error bars on a graph. Now Splus has a function (error.bar --- originally written by Sue Clancy of DMS, CSIRO, I believe) to do this job virtually at the touch of a key. (Well a few keys. :-) ) The error.bar function is written completely in raw S --- no calls to ``.Internal'' or anything like that. So it would be

I am having difficulty installing packages. For example, here I have tried to install "gplots" but to no avail. I have tried multiple mirrors and different packages (errbar) but after installation I seem to be unable to access any of the commands or help pages. I am a little concerned about the 'lib' missing message but this has been present for previous successful package

Hi, I'd like to use R to do what excel pivot tables do, and plot results. I've never used R before, and I've managed to do something, but it's quite a lot of code to do something simple. I can't help but think I'm not "Doing it the R way". I could be using R for the wrong thing, in which case, please tell me off. I was hoping something like plot(by(t,

Is there a function that would allow me to create a line graph of some central tendency, such as mean, with limits indicated by a vertical line at each data point, i.e. SD? It's a fairly common type of graphic, but in looking through examples I have been able to find, I have found no function for such a graph. Thanks in advance, Harvey

My earlier posting should have said "dotchart", not "barchart". 1)  How does one show confidence-intervals in a "dotchart" and use rownames for labels on the y-axes?  I have looked at "plotCI" in "gregmisc" package . But it does not seem to produce something like a dotchart.  The statistic, error, upper-bound, and lower-bound are in a

How do I add error bars to an interaction plot of means? Thanks