similar to: Something broken with update?

Hello, I'm using R 1.40 on MacOS X X.1.2 (installed via the fink package manager). To upgrade my installed packages, I tried to use update.packages() today. All went well for most packages, with the exception of KernSmooth and cluster. In both cases, libraries were not found although I think they are present. Here's what happened: ---------------------------------- >

I always followed http://cran.r-project.org/bin/linux/ubuntu/ to install R on Ubuntu 8.1. I had no errors before! > install.packages("XML") Warning in install.packages("XML") : argument 'lib' is missing: using '/usr/local/lib/R/site-library' --- Please select a CRAN mirror for use in this session --- Loading Tcl/Tk interface ... done trying URL

Dear all yesterday I got around to install R-1.5.1 on my machine at home which, admittedly, is running a very old version of RedHat Linux. I noticed two things: 1) My pdflatex version is too old to produce the pdf version of the manuals. `./configure' checks whether a recent version of makeinfo is installed and tells you whether you can produce the info version or not. (I was told I

Hello, After reinstalling the whole OS and R as well, I tried to update.packages() and get the follwing error message: concerning the mgcv update: atlas2-base is installed and blas as well (on debian). I haven't found lf77blas, I assume it's a library or something similar associated with blas. any suggestion how to solve that, thanks Martin * Installing *source* package

Hi all, I'm very new to R. I have installed R 1.9.0 on Linux (Fedora). Now I got an self-made package comprising R functions as well as C-Code which are used in several R functions. I installed the package without any error (see install log below). Then, I checked in /usr/lib/R/library if the package izbi exists and it exists. But whenever I try to load the library on the command line I

Hi, I'm running R 2.0 installed from the source port on FreeBSd 4.10 and I'm having trouble installing the GRASS package. Following is the procedure plus errors: > options(CRAN="http://cran.us.r-project.org") > install.packages("GRASS") <download snipped> downloaded 186Kb * Installing *source* package 'GRASS' ... ** libs cc

** save image Error in loadNamespace(i[[1]], c(lib.loc, .libPaths()), keep.source) : There is no package called 'class' Using 30 May 2004 developer version of R-1.9.0 trying URL `http://cran.r-project.org/src/contrib/e1071_1.4-0.tar.gz' Content type `application/x-tar' length 325388 bytes opened URL .......... .......... .......... .......... .......... ..........

Using the same settings in config.site as were used for R-1.4.1, R-1.5.0 fails to build. ./configure --enable-R-shlib Using defaults and using PPro optimizations, the build failed in package methods: dumping R code in package 'methods' gmake[4]: *** [../../../library/methods/R/all.rda] Error 139 gmake[4]: Leaving directory `/mnt/Data/src/install/R-1.5.0/src/library/methods' The

Hello, I was trying to compile R-base-0.64.1 on Linux/Alpha (RedHat 6.0). It compiled but it couldn't pass the make check (choked with tests/Examples/modreg-Ex.R). I used gdb, and it turned out that the src/library/modreg/src/sinerp.f was the problem. else if(j.eq.nk)then c1 = 0d0 c2 = 0d0 c3 = 0d0 endif > p1ip(1,j) = 0d0-

Hi I have problem running R (tried 1.8.0 and 1.7.1) under a fresh installed SuSE 9.0 using default settings: I'm not able to send plots to the monitor. Only postscript graphs are produced in external files. When assigning options(device='X11') and then plotting I get the message "Error in X11() : X11 is not available". Since this occured using the r-cran binary I tried

Dear Sirs, I am trying to compile R v1.2.1 under Digital Unix 4.0D. The configure-script runs without any problems but during 'make' I receive the following error-message: [......] g77 -mieee -g -O2 -c dtrco.f -o dtrco.o g77 -mieee -g -O2 -c dtrsl.f -o dtrsl.o g77 -mieee -g -O2 -c eigen.f -o eigen.o g77 -mieee -g -O2 -c lminfl.f -o lminfl.o ar cr libappl.a Rsock.o approx.o bakslv.o

Dear all, I tried to install gstat package and add the following compilation error : ------------------------> * Installing *source* package 'gstat' ... creating cache ./config.cache checking for gcc... gcc checking whether the C compiler (gcc ) works... yes checking whether the C compiler (gcc ) is a cross-compiler... no checking whether we are using GNU C... yes checking whether

Hi, I am building R on RH Linux 7.3 and I noticed that ./configure does not set the optimization flag, -O or -O2, for gcc, but does set for g++ and g77. Why is that? Should I try to set it manually, if yes how? Thanks, Vadim P.S. This is the bottom portion of the ./configure run R is now configured for i686-pc-linux-gnu Source directory: . Installation directory:

Hi all, I've successfully compiled R-1.2 on a Linux box (Mandrake 7.1). However, when I installed packages from sources, I run into problems with the packages logspline and tseries. The error messages are as follows. Can anyone help? The compiler is gcc 2.95.3, if that helps. Andy ================================================ Installing source package `logspline' ... libs gcc

Hi, I installed SJava 0.66-1 on my linux RH 7.2 machine. I am using R-1.7.1. I set LD_LIBRARY_PATH up then called library(SJava) and it was fine. But when I called .JavaInit(), I got weird error that states it could not find java/lang/Hashtable. The session is below and shows my java configuration. I am using j2sdk1.4.2_01 from Sun. Thank you very much. Weiming Zhang > .javaConfig

Dear All, when I try to: install.packages("Design"); install.packages("Hmisc") I get the following error messages: * Installing *source* package 'Design' ... ** libs g77 -mieee-fp -O2 -fomit-frame-pointer -pipe -march=i586 -mcpu=pentiumpro -O2 -fomit-frame-pointer -pipe -march=i586 -mcpu=pentiumpro -c lrmfit.f -o lrmfit.o make: g77: Command not found make: ***

Dear helpers, I am trying to create a library which uses some Fortran source files and Lapack and Blas subroutines. The Fortran source files from the original author contain subroutines isamax.f, sgefa.f and sgesl.f, which are part of BLAS subroutines on my Linux computer, but maybe different (old) versions. So in addition to these subroutines, there are other Lapack and Blas subroutines

Hi! I've been able to configure and make R (1,4,0 linux) except for the gnome support. I've checked all packages and libs mentioned in R-admin.pdf (and by Luke Tierny) to make sure that I have them and even using the following: ./configure --with-gnome --with-gnome-includes=/opt/gnome/include --with-gnome-libs=/opt/gnome/lib --with-libglade-config=opt/gnome/lib I still get: R is now

Hi, I have problems installing RMySQL under R1.8.1 and RHlinux (kernel2.4.7). During compilation I get: ** libs gcc -I/usr/lib/R/include -I/usr/include/mysql -I/usr/local/include -D__NO_MATH_INLINES -mieee-fp -fPIC -O2 -m486 -fno-strength-reduce -g -c RS-DBI.c -o RS-DBI.o gcc -I/usr/lib/R/include -I/usr/include/mysql -I/usr/local/include -D__NO_MATH_INLINES -mieee-fp -fPIC -O2 -m486

Hi, I am trying to install gee on our server but I get the error below. I do not have root on this machine so no control on how R was installed itself. It looks like it cannot find blas libs, the only ones i can find on the machine are: /usr/lib64/libblas.so.3 -> libblas.so.3.0.3 /usr/lib64/libblas.so.3.0 -> libblas.so.3.0.3 /usr/lib64/libblas.so.3.0.3 and : $ R CMD config BLAS_LIBS