similar to: Rdbi/RdbiPgSQL updates

Hi R-users I recently downloaded RdbiPgSQL 1.8.0 and Rdbi 1.8.0 from Bioconductor to be installed under R 2.4.1. When requiring RdbiPgSQL an error message is showed as follows: > require(RdbiPgSQL) Loading required package: RdbiPgSQL Error in library(package, lib.loc = lib.loc, character.only = TRUE, logical = TRUE, : ‘RdbiPgSQL’ is not a valid package – installed <

I just upgraded R to version 2.4.0 and now I can't install packages RdbiPgSQL. I used the same procedure I did for previous versions of R ! Actually, last time I installed RdbiPgSQL day before upgrading but now I got: downloaded 27Kb * Installing *source* package 'RdbiPgSQL' ... creating cache ./config.cache checking for PQconnectdb in -lpq... no I could not find your PostgreSQL

Because my problem involves the RdbiPgSQL package, I sent a message similar to this one to the Bioconductor list. But while awaiting moderator approval of my message (because I am not a member of that list), it occurred to me to send it to R-help as the problem may be more general than just RdbiPgSQL. Here's my situation: I have been using RdbiPgSQL successfully for a year or two. I

Hi, Does the Bioconductor library RdbiPgSQL support the POSIXlt and POSIXct (R time format)?. I tried to import an R data frame which had also some columns of class POSIXct into PostgreSQL 7.2.1 with the command dbWriteTable without success. >str(jame) `data.frame': 8123 obs. of 27 variables: $ kat.st : int 1 2 3 4 5 6 7 8 9 10 ... $ ime : Factor w/ 7867 levels

hello, I wish to create some 3d scatter diagrams visualising different grouped data set by a given field in the database. I tried the scatterplot3d package, as well as the plot3d and scatter3d functions (both within the rgl resp. Rcmdr package). My first question is, whether is it possibe to group data in the scatterplot3d and plot3d, because I did not succeed to use the groups = ...

Full_Name: Markus Neteler Version: 1.0.0 OS: Linux 2.2.10/i686 Submission from: (NULL) (130.75.72.37) Hi, I wanted to "check" the R.GRASS GIS interface from Roger Bivand: http://www.geog.uni-hannover.de/grass/statsgrasslist.html using R CMD check --vsize=10M GRASS but: [error message shortened] > G <- gmeta() Error: heap memory (6144 Kb) exhausted [needed 1024 Kb more]

Hi, I am using the superpc package. By superpc.train (data, type="regression") I calculated the standardized regression coefficients for measuring the univariate effect of each feature on a continuous response y. By superpc.cv(compute.fullcv=TRUE, compute.preval=FALSE, n.components=3, n.fold=10) I used cross validation to estimate the optimal feature threshold and choose only

Hi, I would like to be able to use R with a connection to a PostgreSQL database. I am using R 2.0.1 on windows XP. I have tried installing both the DBI and rDBI packages (which is better?) but in either case I run into the same problem - when i try to use either the dbDriver or dbConnect functions i'm told the function couldn't be found. Seems like the packages aren't installing

I joined my Debian 9 server into a Active Directory Structure as a domain member. Not as a DC. Then when I try to share a folder on this server and the client PC can't correctly authenticate and use the folder. It keeps saying "Access Denied" on Windows client PC. There is no error in log files (/var/log/samba/). If I allow anonymous users, it works fine. I used to use the same

Dear list, I face some problems installing gpclib_1.0-1.tar.gz: R-161 R : Copyright 2002, The R Development Core Team Version 1.6.1 (2002-11-01) [...] system("R CMD INSTALL gpclib_1.0-1.tar.gz") WARNING: ignoring environment value of R_HOME ERROR: This R is version 1.5.0 package 'gpclib' depends on R 1.6.1 The same happens with http://www.bioconductor.org/getBioC.R

Dear all, I am performing a binomial glmm analysis using the lmer function in the lme4 package (last release, just downloaded). I am using the "Laplace method". However, I am not sure about what I should do to test for the significance of fixed effects in the binomial case: Is it correct to test a full model against a model from which I remove the fixed effect I want to test

Dear R-Devel list members I'm facing as problem already known and linked to the use of getGraphicsEvent(prompt = "Waiting for input", ???????????????? onMouseDown = NULL, onMouseMove = NULL, ???????????????? onMouseUp = NULL, onKeybd = NULL, ???????????????? onIdle = NULL, ???????????????? consolePrompt = prompt) setGraphicsEventHandlers(which = dev.cur(), ...)

Hi, I have tried to install the R package Rcplex on windows xp without success. I have only cplex_studio124.win-x86-32 version. I have modified the makevars.win file as indicated in the installation guide ( http://cran.r-project.org/web/packages/Rcplex/INSTALL ), then I zipped the whole folder to order an installation from a zipped file (utils :menuInstallLocal()) The message I had is file

Dear list members, I wonder whether anyone has succeeded in building either the RPgSQL or the Rdbi.PGSQL and Rdbi packages for Windows. If so, would you be willing to share either the binary package(s) or instructions about how to set up the configure scripts? My preliminary efforts to get things going under Windows 2000 haven't met with much success. Thanks, John

Hello guys! I'm using samba 3.2.4 (binaries from samba.org) on SLES9+sp3. I am building a PDC with LDAP support (i am attaching my config files), I'm also using ldapsam:trusted and ldapsam:editposix. Although I am setting the account lock after 3 failed tries in usrmgr, and verified that the parameters are actually set in the LDAP, no locking occurs. I started thinking that it was my

Hello, I know that the topics of using large datasets in R vs. SAS, using PostGreSQL vs MySQL, and using databases with R have been discussed extensively on this list and elsewhere. However I hope that I have a slightly new combination of the questions here. I am doing my PhD research on a large dataset and trying to decide whether to use PostgreSQL or MySQL with R, or simply use SAS, to

I can use the Rdbi package to connect to a PostGreSQL server fine but when I use the dbDisconnect(), I get a segmentation error and it throws me out of R. I'm using RH7.2, R1.4.1, Rdbi 0.1-2, and Rdbi.PgSQL 0.1-2. Anyone else seen anything like this and have an possible answer? Andrew Schuh -.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.- r-help mailing

hi! i am experiencing the same behaviour explained here: http://finzi.psych.upenn.edu/R/Rhelp02/archive/2482.html (i copied the message below) has anybody found a solution? here is the code that gives me a segmentation fault library(Rdbi) library(Rdbi.PgSQL) conn <- dbConnect(PgSQL(), dbname = "PGA") tmp <- "create table test ( expid int, name varchar(128));"

I have been using RODBC for a while with no complaints (R 2.0.1 patched under WinXP), then I saw a link (http://grass.itc.it/statsgrass/r_and_dbms.html) showing that Rdbi claims to run a query in 5 seconds that takes RODBC 4.3 minutes. That was hard enough for me to believe that I wanted to try some tests myself, but I cannot get Rdbi to connect to my ODBC database. Here is what works for RODBC

one more bit of information about this problem. If I start R as the user "postgres" i dont have the segmentation fault. ---------- Forwarded message ---------- Date: Wed, 5 Feb 2003 19:19:39 -0500 (EST) From: Rafael A. Irizarry <ririzarr at jhsph.edu> Reply-To: rafa at jhu.edu To: "R-Help (E-mail)" <r-help at r-project.org> Subject: rdbi segmentation fault hi! i