similar to: using [i] to plot & label all vector elements

I'm using R 1.6.2 on a Windows 2000 machine. I've plotted the results of an MDS run labeled by a numerical ID, and color coded by a group code: plot(cv.mds.spr$points, type="n", main="Non-Metric Multidimensional Scaling of SprRun CV Watersheds") text(cv.mds.spr$points, labels = as.character(cv.wshed.id.spr), col = codes(cv.wshed.grp), cex=.75) Question is, how do I

Thanks for the reply. Will contact you as requested offlist. For this program, ran in the terminal window, but I presume that since it ran "OK", there were no messages in the terminal window* . The problem is that when the program windows open, they don't scroll - the slider bar snaps back to the top and the page doesn't move at all. (*ashin at

I have a data set of monthly river flows from 1960-2000, which are similar in structure to the nottem data: > klam.flow Oct Nov Dec Jan Feb Mar Apr May Jun Jul Aug Sep 1961 1461 1716 2524 1773 1906 2005 1756 1575 1387 983 1094 1382 1962 1907 2253 1985 1907 1769 1676 2634 1386 929 766 968 1309 ... I tried plotting with > ts.plot(klam.flow) Which quickly led me to

Easy question that I can't find an answer for. I'm trying to subset a data frame and want to exclude the positive values, i.e. I want the NA values. My data: > summary(temp$tuna) Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 1 2 3 3 4 5 1211 Querying for subset(temp, tuna %in% "NA", select.... subset(temp, tuna == NA,

This isn't an R issue per se, but given the recent issues with Mozilla and help.search(), I figured I'd float it. I use mozilla on a WIN2000 box. I was using 1.0 and the help.search() wasn't working as has been discussed over the past few days. Yesterday I upgraded to 1.1, and the javascript help still does not work. (I checked and it is enabled.) Another problem I noticed this morning

I have a dataframe that I'm trying to reshape, and need advice. My data: > klam.merge[200:225,] stream lulc x sumlength pct.lgth 200 1223030419685 92 0.25000000 9.89 2.52780586 201 1223030419686 23 0.00274154 4.73 0.05796068 202 1223030419686 41 0.75009917 4.73 15.85833341 203 1223030419686 42 2.65000000 4.73 56.02536998 204

Hi Austin, Alas, no, the program cannot be downloaded, but the CD can be ordered (free) from pariyatti.org. I would be happy to send one, but can only do so in a couple of weeks when I am in BKK (if you could send your mailing address to me privately, I would be more than happy to do so! ashin DOT sopaka at g(ee)mail dot c0m) More info about this can be found at http://www.tipitaka.org/ I also

Does the polymars library exist anymore? I see reference to it at http://rweb.stat.umn.edu/R/doc/html/packages.html, but not on CRAN (looked in contrib and contrib/Old). -- Rob Schick Ecologist NOAA Fisheries Santa Cruz Lab 110 Shaffer Road Santa Cruz, CA 95060 Phone: 831.420.3960 -.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.- r-help mailing list -- Read

I'm using R 1.6.2 on Windows 2000. I have two similar sets of files in two different directories. One contains species presence data and environmental measurements; the other contains species absence data and environmental measurements for the same variables as the presence data. The absence datasets contain many more observations than the presence datasets, and I'd like to draw a

http://bugzilla.mindrot.org/show_bug.cgi?id=667 Summary: Openssh 3.7x, Windows ssh clients and Ldap don't play together Product: Portable OpenSSH Version: 3.7.1p1 Platform: ix86 OS/Version: Linux Status: NEW Severity: critical Priority: P2 Component: PAM support AssignedTo:

Hi- I''m a complete newbie trying to install R and the ''tree'' package on a linux box. I installed R successfully using an RPM for Redhat 6.2. I downloaded the tree*.gz file, ran tar, the fired up R. When I''m at the >prompt in R, and type ''R INSTALL /usr/apps/tree'' I get: ''Error: Syntax error'' I want tree to end up in the

I have a 30 x 27 data frame, which I'm trying to scale and transform. Only I want to scale certain all variables except one (the dependent, which I want to log+1 transform). I can use split() and then scale() and log1p(), but I'm wondering if I can do this in one call. I tried apply(), but I could only get the whole data frame, not a part of it: > test <- apply(chin.sub, 2, log1p)

Hi- I'm trying to run a classification tree, and have received an error I'm unfamiliar with. Following is the R code, and the first 10 lines of my matrix. Any help would be appreciated. > kuv.tree <- read.table("kuv3_mantelmatrix.txt",header=T,sep="\t") > library(tree) > attach(kuv.tree) > ktree <- tree(Species ~ Drig + dwellln, data=kuv.tree) Error

> biplot standardGeneric for "biplot" defined from package "stats" function (x, ...) standardGeneric("biplot") <environment: 0x0d4444d8> Methods may be defined for arguments: x Use showMethods("biplot") for currently available ones. > > > showMethods("biplot") Function: biplot (package stats) x="ANY"

Dears, I've been learning biplot (Gabriel, 1971) and I found the function 'biplot', inside of the package 'stats', useful but, a bit limited. So, I'm thinking to start a colaborative package to enhance this methods to other multivariate methods. In this way, I would like to start it, making public a new function (biplot.pca, still in development, but running) that make

Hello, Something incredible (at least for me) has happen. Yesterday night I downloaded biplot.R to edit this function and add new features I wished. Namely I wanted to plot points belonging to different groups using different colors and symbols. I identified which part of the original code I had to modify. Then, I rename biplot by biplotes and executing biplotes(x), being x a princomp class

Dear R-help fellows good afternoon. I am struggling in the attempt to impose some graphical conditions (changing point symbols, colors, etc) to biplot function (I am using it to visualize the results of princomp) but I can't apparently manage to change anything but the axis... and I have been browsing manuals and vignettes without finding any explicit suggestions on how to operate... Can

Hi everybody, Excuse me for this silly question, but after searching the help archives I'm still unable to find my way to read the source code of the "biplot" function in R. I have installed the mvbutils package, and tried: > fixr(biplot) which only gives me: function (x, ...) UseMethod("biplot") with no further details.... I'd like to read the code to see if

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I'm attempting to modify how biplot draws its red vectors (among other things). This is how I've started: Biplot <- function(xx, comps = c(1, 2), cex = c(.6, .4)) { ## Purpose: Makes a biplot with princomp() object to not show arrows ## ---------------------------------------------------------------------- ## Arguments: xx is an object made using princomp() ##