similar to: questions about batch manipulation

Posted on behalf of chenwj <stop4optimal at hotmail.com> who is having trouble posting. hi all, I'm completely new in R, and here are my questions (under windows): 1. i want to run my four R files (pl1.r -- pl4.r) in batch mode. i'd like to write a batch file using Rterm.exe, since i dont get perl installed on my computer. My experimental batch file (*.bat) didnt work, which

Greetings R Help Group, How does one effect a multiphasic logistic growth model with 4 phases (e.g. Koops 1986; Weigel, Craig, Bidwell and Bates 1992; Grossman and Koops 2003) with R. Before writing to the group, the R help archives were searched, the web was searched with Google, Venables and Ripley 2002 was consulted, Pinheiro and Bates 2000 was consulted, Bates and Watts 2007 was bought and

Dear R-Users I think I am getting the hang of how sweave works. However there is one thing I am struggling with - nice small size graphics. Here is the piece of the Rnw file that creates the figures. <<pl1,fig=TRUE,include=FALSE,echo=false>>= #pdf(file="datapl1.pdf",paper="a4",width=0,height=0); plot(yt,ypred,xlab="Data",ylab="Predicted

Dear all, let consider the following function: Fun1 <- function() { library(lattice) plot1 <- 1:10~1:10 pl1 <- xyplot(plot1) return(pl1$call$x) } In R 2.5.0 (or older version) we have > Fun1() plot1 but starting from R 2.5.1 until the latest R 2.8.0 we obtain instead > Fun1() NULL because pl1$call seems to be equal to xyplot() without arguments. Something like

Hello, I'm trying to generate a log-log plot with ggplot. Within this plot, I would like to draw a straight line with the help of ggabline which does not work. The code is pl1 <- qplot(correlFunc, correlFunc.ref, data=all, log=c("xy")) pl1 <- ggabline(pl1, slope=1, intercept=0) print(pl1) ## no line in plot :( I can produce plots as I want, if I transform all values before

hello, i want to stack two lattice plots beneath each other using one x-axis and sharing the same text-panels, like: ##################################################################### library(lattice) y1 <- rnorm(100,100,10) y2 <- rnorm(100,10,1) facs<-expand.grid(Sites=rep(c("Site I","Site II"),25),Treatment=c("A","B")) pl1<-dotplot(y1 ~

Hello, I would be extremely grateful if anyone is able to provide any (rather obscure) advice on using R with Condor. I think I'm following Xianhong Xie's instructions (R News 5(2) 13-15) correctly, but my job just stays held in the queue (for days / months). I've checked condor_status to make sure there are plenty of machines available, but can't see any way to attack the

hi all, i'v got a question here: i'm writing a *.bat file using Rterm.exe to several simliar R files, which all contain functions from some outside package (eg. quantreg). my question is, how to invoke the package in my *.bat file. Anyone give a hand to me? regards, chenwj Dept. of Statistics Fudan Univerisity, China email: chenwj at online.sh.cn

Hiya, I have read the FAQ for windows and read point 2.10. I setup a dos batch file which contains the following line: C:\progra~1\R\rw2001\bin\Rterm.exe --vanilla I then tried: R CMD BATCH --argument myscript.R result.out then it started R. I thought by running R CMD BATCH executes R non-interactively. I am working on a Windows XP. I tried it on a Mac OSX and that worked fine. So I'm not

Hi I have written a graphical user interface using tcltk. Now I would like to run it under rterm.exe with a batch file. I tried the following code written in a .bat file: d:\R\rw1071\bin\Rterm.exe --no-restore --no-save <d:\RGui.r> d:\RGui.out The problem is that rterm does open but the gui isn't running properly. After a few seconds rterm is closeing without doing anything more

Hello R-people, I have the following problem : In order to run R script from DOS prompt in BATCH mode and pass it some parameters I do the following : Rterm --slave --no-save --no-restore <args.R> args.out ARG1=1 ARG2=2 It works fine : the result is that the script args.R is isexecuted. Sys.getenv() sees the arguments ARG1 and ARG2, and the R creates output file args.out Now I want

Hello guys. I just ran the updated tests for PL2 and they are not giving the mset order I expect.Now,the thing is, dfr's behavior is a bit hard to predict and so even if I expect a particular order ,it may give another order and still be correct.So,the only way to write correct tests for PL2 is to manually calculate the weight of the documents to decide the expected order.For that,I need to

Hello there, I'm trying to do lots of plots in one for-loop. But somehow ggplot does not evaluate arguments as expected. Here is an example: library(lattice) library(ggplot2) pl <- list() pl2 <- list() cDat <- as.data.frame(cbind(x1=0:100,x2=0:10,x3=1:20)) for(obs in c("x1", "x2")) { pl[[obs]] <- xyplot(cDat[,obs] ~ cDat[,"x3"], main=obs)

Hello guys.I just realized that Ive not set the weighting scheme to PL2 in the tests for PL2 and so a default weighting scheme of BM25 is used. I am extremely sorry for this and am updating the tests by setting the weighting scheme to PL2. -Regards -Aarsh -------------- next part -------------- An HTML attachment was scrubbed... URL:

Hi, Here's a problem in openssh, some logs, and a very minor patch that cures this: Issue: (open)ssh client WILL NOT talk to F secure SSH-2.0-2.1.0pl2 client S/W version: openssh-2.3.0p1 client O/S version: SunOS 5.7 Generic_106541-11 sun4u sparc server S/W version: SSH-2.0-2.1.0pl2 server O/S version: SunOS 5.7 Generic_106541-11 sun4u sparc Log/Details: : % telnet <mymachine> 22

Dear developers, I have come across a (somewhat strange) change in the encoding of Sweave output from R-2.9.2pat to R-2.10.0beta (apparently specific to Rgui) on Windows installations. Of course, the NEWS file contains quite a few changes concerning encoding, but I was not able to locate an entry which explains the observed behaviour. I am not very familiar with encodings/locales/codepages,

Dear all, Two questions regarding rterm First: C:\Program Files\R\rw1081\bin\rterm.exe --vanilla <test.r --args "Arg1" "Arg2" worked for me so far with r Version 1081, to start a R script with the given arguments. With R1090 C:\Program Files\R\rw1090\bin\rterm.exe --vanilla <test.r --args "Arg1" "Arg2" There is the error message: Rterm.exe

I'm having problems getting RTERM to work via SSH. Whenever it has any type of problem, it abends instead of issuing an error message and returning to the > prompt. Both "server" and client are Windows/2000 Professional at FP4. SSH is via Cygwin on both sides. R is version is 1071. RTERM runs fine when run in a BASH shell on the "server," though it does not prompt

Hello guys.I have added various tests to the PL2 pull request.They are working fine. Have also added PL2 to the registry and to the java and csharp makefiles.Please do let me know what you'll think.Other than the collection frequency problem discussed on IRC, it is ready.Am now beginning work on adding code and tests for DPH to the same branch. -Regards -Aarsh -------------- next part

Hi, I'm running R v1.9.0 on WinXP Pro. I noticed that R.exe and Rterm.exe behave differently on Ctrl-C. Starting a Windows Command prompt (cmd.exe) you get from running Rterm.exe: C:\Program Files\R>rw1090\bin\Rterm.exe --vanilla --quiet > ^C > ^C > 1+1 [1] 2 > Sys.sleep(100) # Ctrl-C after a few seconds > ^C > ^C > 1+1 [1] 2 > q() C:\Program Files\R>