similar to: problem with levelplot

Dear all, I'm trying to use the as a standalone package the nmath sources. In R-1.4.1/src/nmath/standalone, in linux operating system I made 'make shared' to obtain libRmath.so. then I copied the dir standalone, where there is libRmath.so in /usr/local. I tried to compile test.c with cc test.c but I obtain this error message /tmp/ccsTxu7U.o: In function `main':

Dearl all, I have to fit a function y = f(x1, x2) to data experiemntal data describing the measured behavior of y. x1 and x2 are the independent variables. Could you suggest me wich R package can I use for this purpose? Thanks, Paola. -- *Paola Lecca, PhD* *The Microsoft Research - University of Trento* *Centre for Computational and Systems Biology* *Piazza Manci 17 38123 Povo/Trento,

Dear all, I tried to use nls, but I got the following error Error in numericDeriv(form[[3L]], names(ind), env) : Missing value or an infinity produced when evaluating the model Any suggestion? Thanks, Paola. The code I wrote is Data_pp2_mrna <- data.frame( p1 = protein_1, p6 = protein_6, pp2_mrna

Hello to everybody ! I don't have a question directly connected with R, but it takes starting point from the use of the R function Krig for kriging interpolation and from the idea of making a different implemetation of the function for my purposes. Doas anyone know where can I find free C or C++ codes of kriging ? As always, thanks a lot in advance, Paola.

Dear R users, I'm trying to fit a set an ODE to an experimental time series. In the attachment you find the R code I wrote using modFit and modCost of FME package and the file of the time series. When I run summary(Fit) I obtain this error message, and the values of the parameters are equal to the initial guesses I gave to them. The problem is not due to the fact that I have only one

Hi everybody, I want to download the spatial library but I don't find it at the CRAN list package. Where can I find the package ? I have to download it to use the function correlogram. Thanks in advance, Paola. -.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.- r-help mailing list -- Read http://www.ci.tuwien.ac.at/~hornik/R/R-FAQ.html Send "info",

Dear all, I used modFit of the package FME to fit a set of ODE to a ste of eperiemntal data. The summary of this fit give me the following error > summary(Fit) Residual standard error: 984.1 on 452 degrees of freedom Error in cov2cor(x$cov.unscaled) : 'V' is not a square numeric matrix In addition: Warning message: In summary.modFit(Fit) : Cannot estimate covariance; system is

Dear all, I'm a beginner in spatial regression, therefore, excuse me in advance for the stupid question. I'm using the function Tps of field library. As I read in help, the assumed model for this regression is additive Y = f(X) + e where f(X) is a d dimensional surface. I have understood that d in not an argument to specify in Tps(x, Y, ...). How can I obtain d ? Thanks a lot.

Hi ! is there a package in R dedicated to the signal analysis ? I'm searching for statistical methods for the signal extraction from background in a digital image. Does R have a package to perform this kind of analysis ? Thanks a lot, Paola. -.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.- r-help mailing list -- Read

Hi ! I have again problem with nmath standalone sources package. Following the suggestion of Reid, I did control that /usr/local, in which I copied the dir standalone, is listed in /etc/ld.so.conf. However, because of my big ignorance, I don't understand how I have to do the linkage to Rmath during the compilation of a source. What does it mean: "and link against -lRmath" in

Hello everybody ! I want to evaluate the goodness of the fit of a trend surface. I use the Least square methods and the function surf.ls. The I write tma3.sur3 <- surf.ls(3, x, y, z) summary(tma3.sur3) Now the question: is the Pr(>F) the probability to obtain a value of F equal or greater than the obtained one ? Is the confidence level 0.05 ? Thanks a lot for any help. Paola.

Hi ! Sorry for my ignorance. I have two questions: 1) which is in R the function to make a covariogram of spatial data ? 2) does anyone know if there exist the possibility in R of performing kriging with an arbitrary covariance function ? If I have well understood the Krig procedure offers only three possibilities (expcov, gauscov and sphercov) that are the common models for stationary and

Hi ! 1) First question. Excuse me for trouble with the same question. I still have problems with the compilation of test.c in src/nmath/standalone. I did follow the instructions you gave me but I still receive this message [root at my standalone]# cc -o test test.c -L/usr/local -lRmath /usr/local/libRmath.so: undefined reference to `log' /usr/local/libRmath.so: undefined reference to

Hi there, I have a question concerning the behaviour of the colouring with levelplot. (I hope, I manage to explain) If I give the parameters "at" and "col.regions" like this: at <- c(1,2,3,4,5,6) col.regions <- c("blue","blue","blue","yellow","yellow","yellow") Which color would have the value 3.5? I would

R folks, I can't seem to find the instructions in the help files for the lattice package that explain how to add lines, such as with lines() or ?, to a levelplot. I'd be grateful if someone could point me in the proper direction. Cheers, Jeff ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Jeff Jorgensen Center for Limnology jcjorgensen at wisc.edu

Hi everybidy Does anybody knows the code in R relate to MANCOVA???I saw somewhere lm(Y`...) but ma not so sure.. Thanks in advance!! Paola -- View this message in context: http://r.789695.n4.nabble.com/MANCOVA-tp4647735.html Sent from the R help mailing list archive at Nabble.com.

Dear guRus, I'm having trouble producing a levelplot with relative cuts for each panel (my data has large differences in scales, so I want to use quantiles for each panel). My attempts to change the 'at' argument in panel.levelplot function have not met with success. Below is a toy example. xy <- expand.grid(x = 1:3, y = 1:3) aaa <- rbind(cbind(xy, z = 1:9, site =

Hello, I want to add a single contour line to a levelplot but can't figure out how to do it 'on-the-fly'. When I include the last line in the code below, I get the following error: Error in NextMethod("[") : Argument "subscripts" is missing, with no default Any tips on how to fix this are greatly appreciated! Ian Jonsen

Dear mailing list, I am trying to find out, how do a levelplot without labels on the x- and y-axis. The labels=FALSE does not work...can anyone help me? m <- matrix(1:25, ncol=5) levelplot(m, labels=F) Regards, Benedikt

Hello there, I am creating a series of images using levelplot but I also want to overlay a contour for a particular value as reference. Here is the levelplot command for the image: print(levelplot(d~x+y,data=t,cuts=20,scales=list(draw=F),xlab=NULL,ylab= NULL,col.regions=heat.colors(100)[100:1]),split=c(1,1,1,1),more=T) and then to add the contour plot (I only want a contour at level 5):