similar to: netCDF

Greetings. I am attempting to add NetCDF libraries within R, and have failed. We have R version 2.8, and are running on a 64-bit Redhat Linux 2.6.18 kernel: Red Hat Enterprise Linux Client release 5.2 (Tikanga) Linux halfmoon.ncdc.noaa.gov 2.6.18-92.1.22.el5 #1 SMP Fri Dec 5 09:28:22 EST 2008 x86_64 x86_64 x86_64 GNU/Linux I have run the installation instructions found at

Hi! I have been coding a C-program which will read data from the netCDF format (a commonly used file format in the geophysical research community: see Unidata's URL for explanation: http://www.unidata.ucar.edu/packages/netcdf/), and have got to the point where I don't know what the error message mean. The C-program is called nc2r.c. When compiling the code, I get a number of warnings,

Friends, I tried to install ncdf package in ubuntu with the following command. R CMD INSTALL --configure-args="-with-netcdf_incdir=/apps/netcdf/4.0.1/gcc/include -with-netcdf_libdir=/apps/netcdf/4.0.1/gcc/lib" ncdf_1.6.tar.gz The installation was stopped throwing the following error. I tried to google it but didnt find any solution. someone kindly write me what is going wrong. **

Having trouble with netCDF since I upgraded to 1.2.1 (did directly from 1.1.1). Package was recompiled after the upgrade. Symptoms: open.netCDF returns cleanly, but read.netCDF causes R to segfault and dump core. What else do you need me to write to help? --please do not edit the information below-- Version: platform = i586-pc-linux-gnu arch = i586 os = linux-gnu system = i586, linux-gnu

Dear R communities Could you please help me with the problem I encounter while trying to install the ncdf package? download.packages("ncdf", "/home/user/soft/R/library/") cd /home/user/soft/R/library R CMD INSTALL ncdf_1.6.tar.gz # fail sudo R CMD INSTALL ncdf_1.6.tar.gz # fail cd /home/user/soft/ # download

Dear R users I am attempting to add lncdf_1.6.tar.gz libraries within R, and have failed. I have R version 2.8.1, and are running on fedora 10 Kernel Linux 2.6.293.-60.fc10.x86_64. I've run R CMD INSTALL ncdf_1.6.tar.gz and I have the following --------------- * Installing to library '/usr/lib64/R/library' * Installing *source* package 'ncdf' ... checking for gcc... gcc

Hi All, I am trying to install ncdf package on a Linux 64-bit machine. I successfully installed netcdf using this command, ./configure --prefix=/home/challar/netcdf/ --disable-netcdf4 I then tried to install ncdf package in R R CMD INSTALL --configure-args="-with-netcdf_incdir=/home/challar/netcdf/include -with-netcdf_libdir=/home/challar/netcdf/lib" ncdf_1.6.3.tar.gz I get this

Hello, I experienced a strange behaviour of callNextMethod when used in either initialize or any other S4 function method definition. Help says callNextMethod calls the next inherited method for the current function from where it is called with the same actual (non missing) arguments. This is OK. The problem appears when some formal arguments (in particular, S4 objects) of this function are

I am attempting to install the netCDF module into R on a computer running solaris 5.8 but it keeps saying it can not find the required netCDF libraries & header files, error below. I have run configure, as ./configure --with-netCDF=/usr/local/netcdf-3.5.0 To configure the path, but keep getting the following error. climate at netCDF : > R CMD INSTALL /home/climate/murphyb/netCDF *

Does anyone know of a module for R to access NetCDF datasets? I remember reading about a module for Splus, but I can't seem to find anything on CRAN. -.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.- r-help mailing list -- Read http://www.ci.tuwien.ac.at/~hornik/R/R-FAQ.html Send "info", "help", or "[un]subscribe" (in the

Dear All, I recently got a 64bit machine and had netcdf-3.6.2 installed. Then I tried to install ncdf package but got the following error message when using netcdflib: gcc -std=gnu99 -I/home/ljin/share/R-2.6.1/include -I/home/ljin/share/R-2.6.1/include -I. -I/usr/local/include -fpic -g -O2 -c ncdf2.c -o ncdf2.o gcc -std=gnu99 -I/home/ljin/share/R-2.6.1/include

Hello, I have been having difficulties opening netcdf files using the netcdf library. I am able to successfully open the file and I can determine the names and size. However, when I try to read it I receive an error. Reading the documentation, I am wondering if this might be due to a difference between netcdf version 2 and more recent netcdf format? I've tried using different values for the

Dear all, working with R under Linux, I am not able to install the ncdf-package. The following appears: install.packages("ncdf") Warnung in install.packages("ncdf") : argument 'lib' is missing: using '/user/silke/R/x86_64-unknown-linux-gnu-library/2.6' --- Please select a CRAN mirror for use in this session --- Loading Tcl/Tk interface ... done versuche URL

Dear all, I would like to use data in .netcdf format and for those I have to use the netCDF or ncdf packages. Problem : these packages don't seem to work : "Error in testRversion(descfields) : This package has not been installed properly See the Note in ?library" (with netCDF package) Does anybody have the same problems with these packages ? Is there any

Buenas tardes, gracias a ambos por su ayuda, conseguí con éxito finalmente instalar ambos paquetes y abrir el netcdf de versión 4 desde RStudio. Mi consulta al siguiente paso, después de buscar sobre el tema es, como creo que no es posible realizar la transformación de netCDF-4 a netCDF-3, ¿es posible guardar con raster ese archivo .nc que pude abrir en R y ya llevarlo al SIG? Para ello he

I was trying to install software named ncview on a centos 5.3 box. ./configure command gave this error: Error, the X libraries and development headers must be installed for ncview to work! I was surprised that there were many google hits related to ubuntu, none for centos. So even though I eventually figured out what to do, I decided to share this with the list anyhow, so maybe next time I

Hi, I am using the package ncdf to create netCDF files and I want to mimic the the header of an exiting netCDF file created outside of R. Below is what the existing header looks like (part of it that is different): netcdf ccd1984_05_08 { dimensions: lat = 1974 ; lon = 1894 ; time = UNLIMITED ; // (1 currently) variables: int time(time) ;

I am looking for a package to read and write NetCDF files. NetCDF package says it can only read, not write. Another package for the standard binary file format? Daehyok Shin

Hello R-Group, I am new working with netcdf files and the raster package in R.I am trying to read in a netcdf file using the package "ncdf".I am able to get the lat, lon and parameter I need and can plot using fill.contour.Ultimately, I am trying to create a .asc file to reafd into GIS.I am using the package "raster" to read the parameter.When I read in with

summary: I can successfully ncvar_put(...) data to a file, but when I try to ncvar_get(...) the same data, I get > Error in if (nc$var[[li]]$hasAddOffset) addOffset = nc$var[[li]]$addOffset else addOffset = 0 : > argument is of length zero How to fix or debug? details: R code @ https://github.com/TomRoche/GEIA_to_NetCDF successfully (if crudely) uses R packages={ncdf4, maps, fields}