similar to: compiling on alpha/linux

Hi, all. In trying to compile R v.0.90 on an alpha running Red Hat Linux 6.0, I'm getting the following error: make[3]: Entering directory `/home/mcw/alpha-R/R-0.90.0/src/appl' gcc -I. -I../include -I../../src/include -DHAVE_CONFIG_H -mieee -g -O2 -c cpoly.c -o cpoly.o /tmp/ccPjZNwd.s: Assembler messages: /tmp/ccPjZNwd.s:312: Error: unknown opcode `sqrttsu' /tmp/ccPjZNwd.s:2631:

I am trying to get R 1.0 running on the Mac. The main target is MacX. Anyone else working on that? For the recent Macintosh system, I am trying to compile R using MachTen. The R core compiles and runs without any changes, using the Unix make files. The libraries give some problems, presumably due to handling of shared libraries. It seems I am missing something to link. Before I spend my time

Hi, I have a problem with getting through the make process. It fails during the ld process. Can someone explain the errors that I get ? `Makedeps' is up to date. `libappl.a' is up to date. `libmath.a' is up to date. `libunix.a' is up to date. `../../bin/R.X11' is up to date. building package `base' ../../../library/base/R/base is unchanged building package `ctest'

Hi, I'm trying to compile R-1.7.1 from source (on a RedHat 8.0) instead of using the binary version, as it has often been advised. However I don't manage to find a solution to the following error which occurs during the make procedure : /!\-------------------------------------------/!\ building package 'ctest' mkdir -p -- ../../../library/ctest/R mkdir -p --

I tried to build R-1.1.1 on my HP-UX 10.20 box. For this I installed gcc 2.95.2 and built g77 (version 2.95.2 19991024 (release)). Making R runs to the point, where shared libs are linked. There it reports: make[4]: Entering directory `/disk4/hoffmann/Work/rwork/src/library/ctest/src' gcc -I../../../../include -I/usr/local/include -fPIC -g -O2 -c

I have determined why there are many "WARNING: Duplicate symbol:" messages. *** My apologies for the length *** There is a lot of detail - but I hope the detail will help R - and others - setup correct options for shared libraries. *** As I press send, I have not stopped testing (my final trial here might not even work) - but! *** the message is that shared libraries do not need to have

Hi, been trying to build R-1.5.1 for som eof our users here. No probs with gcc-3.2 32-bit installtion, but thought we'd try it with the 64-bit just for the crack. Configuring thus CC=gcc3 CFLAGS="-m64" CXX=g++3 CXXFLAGS="-m64" F77=g773 FFLAGS="-m64" LDFLAGS="-m64 -L/usr/local/packages/gcc-3.2/lib/sparcv9" ./configure

Dear Sirs, I am trying to compile R v1.2.1 under Digital Unix 4.0D. The configure-script runs without any problems but during 'make' I receive the following error-message: [......] g77 -mieee -g -O2 -c dtrco.f -o dtrco.o g77 -mieee -g -O2 -c dtrsl.f -o dtrsl.o g77 -mieee -g -O2 -c eigen.f -o eigen.o g77 -mieee -g -O2 -c lminfl.f -o lminfl.o ar cr libappl.a Rsock.o approx.o bakslv.o

I want to report the progress of my attempts to get R running on HP-UX with gcc: Firstly, I could work around the PIC problem by leaving out all the lib stuff (I rebuilt gcc with --enable-share, but this (alone) did not help), e.g. the line gcc -shared -fPIC -o ctest.sl ansari.o fexact.o kendall.o ks.o prho.o swilk.o -L/usr/local/lib -lg2c -lm -L/lib/pa1.1 -L/usr/lib/pa1.1 -u main

Hi all, Trying to install R-1.7.1 on a RedHat 8.0 platform, I have a few problems. R gets installed without default packages (but base and ctest) : make script fails at the end of the procedure (configure is made successfully). This is the (translated) log I have : /gcc -I../../../../include /usr/include/mysql -D__NO_MATH_INLINES -mieee-fp -fPIC -g -O2 -c ansari.c -o ansari.o gcc: cannot

Dear R-help community, I have had trouble in the past installing the latest version of R: we got the errors shown below (the computer specifications and version of R are below that). Does anybody have tips for compiling the latest version of R so that I can avoid these errors? configure make ... ... ... f90: CODE: 0 WORDS, DATA: 0 WORDS gcc -G -L/usr/local/lib -o stats.so init.o kmeans.o

Hello there, I am having trouble installing R-2.6.1 on GNU/linux. Here is how I configure and run it: ./configure --with-x=no --enable-R-shlib make The configure step is uneventful, the tail end of make follows. Does anyone have any experience with that? Thanks a lot in advance for any suggestions. gcc -std=gnu99 -shared -L/usr/local/lib -o stats.so init.o kmeans.o ansari.o bandwidths.o

I tried building R-1.6.1 under Mac OS X 10.2.2 and experienced the following build failure: <...stuff omitted...> cc1: warning: changing search order for system directory "/usr/local/include" cc1: warning: as it has already been specified as a non-system directory gcc -bundle -flat_namespace -undefined suppress -L/usr/local/lib -o ctest.so ansari.o chisqsim.o d2x2xk.o

Hello, I tried to compile v2.3.1 on Solaris x86 with SUN Pro compilers. I had an error while stats libarary was being compiled and I notice that "-xtarget=generic64" was not passed to f95 while cc used it. Could you tell me how to fix this problem? f95 -PIC -O -I/mounts/devel/SUNWspro/prod/include -c sgram.f -o sgram.o f95 -PIC -O -I/mounts/devel/SUNWspro/prod/include -c

Hi All, We have a mixed environment running with Windows and Linux with samba as the domain controller.  Smart card login is configured and working properly with pkinit and certs, etc (https://wiki.samba.org/index.php/Samba_AD_Smart_Card_Login) though I don't think this is related. A handful of Windows clients are regularly getting their accounts locked during what seems to be a

Hi, I'm attempting to compile R 2.7.0 on my G5, which is running OSX 10.5.2. Yes, I know there is a precompiled binary, but my experience has shown that if I hand-compile ATLAS on my machine and then link R against it when compiling, R runs faster, hence me compiling it myself. Anyway, I have this set of errors: checking X11/Intrinsic.h usability... no checking X11/Intrinsic.h presence...

The help page for ansari.test() says (emphasis added): By default (if exact is not specified), an exact p-value is computed if both samples contain less than 50 finite values **and there are no ties**. Otherwise, a normal approximation is used. However, this does not appear to be the case in R 2.4.1 or R 2.5.0. In fact, even example(ansari.test) produces a warning Warning message:

Hello out there, my first try to install a package (e.g. ctest from CRAN) didn't succeed; looking at the error messages I think it must be a configuration problem of my machine, but as I'm not very experienced I would be glad if someone could give me a hint ... R's version is 0.63.0, my i386-Linux is kernel 2.0.35. I hadn't had problems to compile R, and R itself seems to work.

A recent message on ansari.test() prompted me to play with the examples. This doesn't work for me in R version 2.4.1 R> ansari.test(rnorm(100), rnorm(100, 0, 2), conf.int = TRUE) Error in uniroot(ab, srange, tol = 1e-04, zq = qnorm(alpha/2, lower = FALSE)) : object "ab" not found It looks like there's a small typo in ccia() inside ansari.test.default() in which

Hi all, This is a statistics question, I hope someone out there will be able to help me. I have one population (oligonucleotide probes spotted on a Nimblegen array). I measured "parameter one" (intensity after hybridisation) and I have selected a subpopulation of the initial (one tenth of the initial) according to a threshold value. I now measure "parameter two" of