similar to: patch for scan.c for long vector support

Hi Dirk, One side observation: r-cran debian now seems to be in Ubuntu 20.10 Universe so I don't need to add the repo any more. Here is a reproducible example that fails with the latest r-cran-rcppparallel but works when I manually install the source package: require(rstan) stancode <- 'data {real y_mean;} parameters {real y;} model {y ~ normal(y_mean,1);}' mod <-

Muchas gracias por la respuesta. He mirado y los coeficientes no son altos pero sí tengo una gran cantidad de ceros en la variable dependiente (más del 90%). Sin embargo, al incluir otro tipo de variables independientes no me da ese aviso, dejando la misma variable dependiente. ¿Cómo podría utilizar stan/rstan de forma sencilla para diagnosticar el modelo? Muchas gracias El Lun, 9 de Abril de

¿Quieres decir que para un nivel de una variable categorica todas las observaciones de la variable respuesta sean ceros? Gracias El Lun, 9 de Abril de 2018, 19:59, Carlos J. Gil Bellosta escribió: > ¿Podría ser que para algún nivel de alguna variable independiente > categórica solo hubiese ceros? En ese caso, casi seguro, aparecería ese > tipo de warning. > > El lun., 9 abr. 2018 a

Hola de nuevo Carlos, he probado a quitar esa variable categórica y me sigue dando el aviso... El Lun, 9 de Abril de 2018, 20:17, Carlos J. Gil Bellosta escribió: > Si, creo que el motivo del warning puede ser ese. Es hipotético, pero > plausible. Sobre todo cuando tienes más de un 90% de ceros. > > El coeficiente de ese nivel para el modelo de la mixtura (ceros vs > binomial >

RHEL 6 installed R version 3.2.3 from EPEL installed Start R and use the following command, but got warnings! install.packages("rstan", dependencies = TRUE, repos = "http://cran.r-project.org/") ... g++ -m64 -shared -L/usr/lib64/R/lib -L/usr/local/lib64 -o RcppEigen.so RcppEigen.o RcppExports.o fastLm.o -L/usr/lib64/R/lib -lRlapack -L/usr/lib64/R/lib -lRblas -lgfortran -lm

Got past my libgfortran issue ln -s /usr/lib64/libgfortran.so.3 /usr/lib/libgfortran.so Now if I could get RCurl and rstan installed. Thanks, Larry -----Original Message----- From: Tom Callaway [mailto:tcallawa at redhat.com] Sent: Friday, January 29, 2016 2:46 PM To: Patrick, Larry B [CSSM] <longplay at iastate.edu>; 'r-sig-fedora at r-project.org' <r-sig-fedora at

Hello, This problem originally surfaced as an interaction between 'brms', 'rstan' and 'Rcpp' [1]: a call to dimnames() from the 'brms' package on an object of an S4 class owned by the 'rstan' package tried to load its namespace. rstan:::.onLoad needs to load Rcpp modules, which uses load actions and reference classes. Since methods:::.findInheritedMethods

>>>>> Ivan Krylov via R-devel >>>>> on Fri, 27 Sep 2024 13:32:27 +0300 writes: > Hello, > This problem originally surfaced as an interaction between 'brms', > 'rstan' and 'Rcpp' [1]: a call to dimnames() from the 'brms' package on > an object of an S4 class owned by the 'rstan' package tried to

Both RCurl and rstan seem to have installed now. Did the following on my RHEL6 server: [root at ping ~]# export PKG_CONFIG_PATH=$PKG_CONFIG_PATH:/usr/lib64/pkgconfig/ [root at ping ~]# /usr/bin/curl-config --libs -L/usr/lib64 -lcurl Now the output from your previous commands look like: [root at ping ~]# pkg-config --list-all |grep libcurl libcurl

Frank, Your html mail still upsets my reader so still no quote. I do not know what you refer to as "r-cran". Maybe you mean that Debian and Ubuntu have packages in the distro? If so that is true since say 2003 when I started adding via r-cran-rodbc which were actually followed by your design package before it was rms and on cran... To take the rstan example, it is in Debian

Looks to have libgfortran installed. yum list installed | grep libgfortran libgfortran.x86_64 4.4.7-16.el6 @rhel-x86_64-server-6 What else could I check? Installed libcurl-devel and libidn-devel. yum list installed | grep libcurl libcurl.x86_64 7.19.7-46.el6 @rhel-x86_64-server-6 libcurl-devel.x86_64

Hi Dirk, Apologies for the html. I think I'm missing something simple.?? Ubuntu 20.10 uses /etc/apt/sources.list.d to hold repo information and I have this file there: marutter-ubuntu-rrutter4_0-focal.list with contents: deb http://ppa.launchpad.net/marutter/rrutter4.0/ubuntu/ focal main # deb-src http://ppa.launchpad.net/marutter/rrutter4.0/ubuntu/ groovy main I ran sudo apt

Confirmed that gcc-gfortran is installed Package gcc-gfortran-4.4.7-16.el6.x86_64 already installed and latest version What could I check next? I do not have the following installed and will get that done and tested again. libcurl-devel libidn-devel Thanks, Larry -----Original Message----- From: Tom Callaway [mailto:tcallawa at redhat.com] Sent: Wednesday, January 27, 2016

Buenas tardes, Estoy estimando un modelo binomial negativo de ceros inflados (ZINB) utilizando el comando zeroinfl() del paquete pscl. Al ejecutarlo me da el siguiente aviso: Warning: glm.fit: fitted probabilities numerically 0 or 1 occurred ¿Sabéis que significa y si puedo usar el modelo aún con ese aviso? ¿Los coeficientes son fiables? Muchas gracias, Miriam

Hi all, I am new. I am installing the library sjPlot on Ubunto 16.10 and I guess it is installing some dependencies. But it is taking more than 1.5 hours, is it possible? It has right now halted (hope momentarily) in installing the package 'rstan', particularly the file lang__grammars__statement_grammar_inst.o Other packages installed include: dygraphs, colourpicker, raster. Is it good

Hi Dirk, I didn't capture the output but using Focal I got an error with RcppParallel trying to open a file that wasn't found, and plotly::ggplot() would not render a ggplot graph. 20.10 is working well for me otherwise. Frank http://fharrell.com http://biostat.mc.vanderbilt.edu/FrankHarrell Twitter: @f2harrell ---- On Sun, 25 Oct 2020 11:52:43 -0500

Hi all, I can't get the functionality of the package parallel to work. Specifically, makeCluster() hangs when I run it. I first noticed the problem when trying to run Rstan with multiple cores and the traced it back to the core package parallel. The following results in R hanging after the call to makeCluster. library(parallel) # Calculate the number of cores no_cores <-

That is very strange. I am using Ubuntu 16.04 and managed to install it in less than 5 minutes. OA On Wed, Jan 10, 2018 at 12:00 PM, Luca Danieli <mr.lucedan at hotmail.it> wrote: > Hi all, > > I am new. I am installing the library sjPlot on Ubunto 16.10 and I guess > it is installing some dependencies. But it is taking more than 1.5 hours, > is it possible? > > It

I got a new laptop in September and installed Stretch (I had been using Jessie), and I tried to follow the instructions on https://cran.r-project.org/bin/linux/debian/, as I had multiple times in the past: I added deb http://cran.wustl.edu/bin/linux/debian stretch-cran34/ to the end of sources.list, I followed the rest of the above directions as of early September, as best I recall, and I only

On 02/03/2016 09:52 AM, Tom Callaway wrote: > Are you trying to build R and components for i686 rather than x86_64? Never mind. Your logs make it clear that you're building for x86_64. Can you share the output of: pkg-config --list-all |grep libcurl curl-config --libs rpm -V libcurl-devel libcurl I'm honestly baffled as to why the configure script is failing to find libcurl.pc on