similar to: [patch] Use JIT for PCRE pattern matching

Hello, I think I've found a bug in the C function do_grep located in src/main/grep.c. It seems to affect both the latest revisions of R-2-13-branch and trunk when compiling R without optimizations and with it's own version of pcre located in src/extra, at least on ubuntu 10.04. According to the pcre_exec API (I presume the later versions), the ovecsize argument must be a multiple of 3 ,

Full_Name: John Brzustowski Version: R-devel-trunk, R-2.4.0 OS: linux, gcc 4.0.3 Submission from: (NULL) (206.248.157.184) This isn't a bug, but an easily-remedied performance issue. SYMPTOM > for (i in 1000 * (1:20)) { y <- paste(rep("asdf", times=i), collapse=" ") t <- system.time(strsplit(y, " ", fixed=TRUE)) cat(sprintf("i=%5d

On our Scientific Linux 6, there is gcc --version gcc (GCC) 4.4.7 20120313 (Red Hat 4.4.7-17) and later version (a symbolic at HOME to the system directory), export MKL=/home/jhz22/11.3.3.210/mkl export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$MKLROOT/lib/intel64 ./configure --prefix=/home/jhz22 LDFLAGS=-L/home/jhz22/lib CPPFLAGS=-I/home/jhz22/include \ --enable-R-shlib --with-lapack \

Thanks again, sorry I didn't specify this. I am loading new libraries to get to this point. The script I run for "configure" is: #Load the new curl module module load libs/gcc/4.4.7/curl/7.47.1 #Load the new xzutils module module load apps/gcc/4.4.7/xzutils/5.2.2 #Load the new zlib module module load libs/gcc/4.4.7/zlib/1.2.8 #Load the new bzip2 module module load

Dear R-developers, I would appreciate any insights over compiling R 3.4 with Intel MKL -- I have been successful until R 3.3.3 but now it stops complaining about pcre though it worked without Intel MKL as follows, ./configure LDFLAGS=-L/genetics/data/software/lib CFLAGS=-fPIC -I/genetics/data/software/include --enable-R-shlib I have used, export MKL_NUM_THREADS=15 export

Hello, Thanks again. I have checked the configure step, the only messages I get containing pcre are: checking for pcre_fullinfo in -lpcre... yes checking pcre.h usability... yes checking pcre.h presence... yes checking for pcre.h... yes checking pcre/pcre.h usability... no checking pcre/pcre.h presence... no checking for pcre/pcre.h... no checking if PCRE version >= 8.20, < 10.0 and has

Hi to all... After a hard search i dont found the way to install Vanitygen to make Bitcoin addres on centos. After 3 days i decide to find the way and make the how to. I post the how to on bitcointalk.com and want to share with centos people. How to link: https://bitcointalk.org/index.php?topic=641328.msg7159690#msg7159690 Post on Bitcointalk: Was realy hard to make these install, but now

I am trying to compile R-2.4.1 in 64-bit on Solaris 10 running on AMD hardware. I am trying to do this with Sun Studio 11. My config.site looks like this: #! /bin/sh AR="/usr/ccs/bin/ar" TEX="/usr/local/teTeX/bin/i386-pc-solaris2.10/tex" LATEX="/usr/local/teTeX/bin/i386-pc-solaris2.10/latex" PDFTEX="/usr/local/teTeX/bin/i386-pc-solaris2.10/pdftex"

I am trying to compile R-2.4.1 in 64-bit on Solaris 10 running on AMD hardware. I am trying to do this with Sun Studio 11. My config.site looks like this: #! /bin/sh AR="/usr/ccs/bin/ar" TEX="/usr/local/teTeX/bin/i386-pc-solaris2.10/tex" LATEX="/usr/local/teTeX/bin/i386-pc-solaris2.10/latex" PDFTEX="/usr/local/teTeX/bin/i386-pc-solaris2.10/pdftex"

I am trying to compile R-2.4.1 in 64-bit on Solaris 10 running on AMD hardware. I am trying to do this with Sun Studio 11. My config.site looks like this: #! /bin/sh AR="/usr/ccs/bin/ar" TEX="/usr/local/teTeX/bin/i386-pc-solaris2.10/tex" LATEX="/usr/local/teTeX/bin/i386-pc-solaris2.10/latex" PDFTEX="/usr/local/teTeX/bin/i386-pc-solaris2.10/pdftex"

I am trying to compile R-2.4.1 in 64-bit on Solaris 10 running on AMD hardware. I am trying to do this with Sun Studio 11. My config.site looks like this: #! /bin/sh AR="/usr/ccs/bin/ar" TEX="/usr/local/teTeX/bin/i386-pc-solaris2.10/tex" LATEX="/usr/local/teTeX/bin/i386-pc-solaris2.10/latex" PDFTEX="/usr/local/teTeX/bin/i386-pc-solaris2.10/pdftex"

Hi all, I've encountered a build error with the latest R source (2.8.1). This is a relatively fresh install of OS Leopard (10.5.6), latest developer tools installed, gcc/g++/gfortran version 4.4 installed (via http://hpc.sourceforge.net/, after which I updated the gcc & g++ symlinks to link to the 4.4 versions; gfortran used the 4.4 version without updating the symlink). Ultimately I

The build system rolled up R-4.0.0.tar.gz (codename "Arbor Day") this morning. The list below details the changes in this release. You can get the source code from http://cran.r-project.org/src/base/R-4/R-4.0.0.tar.gz or wait for it to be mirrored at a CRAN site nearer to you. Binaries for various platforms will appear in due course. For the R Core Team, Peter Dalgaard These are

The build system rolled up R-4.0.0.tar.gz (codename "Arbor Day") this morning. The list below details the changes in this release. You can get the source code from http://cran.r-project.org/src/base/R-4/R-4.0.0.tar.gz or wait for it to be mirrored at a CRAN site nearer to you. Binaries for various platforms will appear in due course. For the R Core Team, Peter Dalgaard These are

The build system rolled up R-4.0.0.tar.gz (codename "Arbor Day") this morning. The list below details the changes in this release. You can get the source code from http://cran.r-project.org/src/base/R-4/R-4.0.0.tar.gz or wait for it to be mirrored at a CRAN site nearer to you. Binaries for various platforms will appear in due course. For the R Core Team, Peter Dalgaard These are

Hello, I am trying to build R from source on Scientific Linux release 6.9 (Carbon), Linux version 2.6.32-696.3.2.el6.x86_64 (Red Hat 4.4.7-18). I load the needed modules and run: *./configure --prefix $install_dir --with-blas --with-lapack --enable-R-shlib 2>&1 | tee config-R-$version.log* The "configure" command seems to run ok: *R is now configured for

Hello, Are there any R functions available for performing a serial correlation test for short time series (e.g, series having between 10-14 observations)? Many thanks! Isabella R. Ghement, Ph.D. Ghement Statistical Consulting Company 301-7031 Blundell Road, Richmond, B.C., Canada, V6Y 1J5 Tel: 604-767-1250 Fax: 604-270-3922 E-mail: isabella at ghement.ca Web: www.ghement.ca -----Original