similar to: Problem when installing lme4 under Debian stretch

Thanks very much, Dirk! I gave that a try and got the following: pi at raspberrypi:~ $ sudo apt-get install r-cran-car Reading package lists... Done Building dependency tree Reading state information... Done Some packages could not be installed. This may mean that you have requested an impossible situation or if you are using the unstable distribution that some required packages have not yet been

Dear all, I have had some rather serious difficulties getting graphics and analysis packages to load in R on my new Ubuntu Install. The trouble seems to begin when attempting to install TMB. I have done a full purge of r-base r-base-dev and r-base-core and reinstalled the newest version of RStudio (not that this should matter). I'm not sure what to try next. many thanks! Brandon Z >

Hi, apparently you are using the backport of R 3.4.2, which provides r-api-3.4. With this backport installed, you cannot use the binary packages from the stretch archive. > | The following packages have unmet dependencies: > | r-cran-car : Depends: r-api-3 > | > | Depends: r-cran-pbkrtest but it is not going to be installed > | Depends:

On 21 October 2017 at 15:04, John Woodard wrote: | Thanks very much, Dirk! I gave that a try and got the following: | pi at raspberrypi:~ $ sudo apt-get install r-cran-car | Reading package lists... Done | Building dependency tree | Reading state information... Done | Some packages could not be installed. This may mean that you have | requested an impossible situation or if you are using the

Hi, The R CMD check is successful in R 3.0.1 but fails to install package lmerTest under R-devel r63910, Here is what I get: ** preparing package for lazy loading Error in reconcilePropertiesAndPrototype(name, slots, prototype, superClasses, : no definition was found for superclass "merMod" in the specification of class "merModLmerTest" In DESCRIPTION file I have:

try to Rcmdr package install? but the last message show me error, The downloaded source packages are in ??? ?/tmp/RtmpKic0qw/downloaded_packages? Warning messages: 1: In install.packages() : ? installation of package ?nloptr? had non-zero exit status 2: In install.packages() : ? installation of package ?lme4? had non-zero exit status 3: In install.packages() : ? installation of package

> Date: Sat, 8 Jun 2024 19:16:22 -0400 > From: Ben Bolker <bbolker at gmail.com> > > The ASAN errors occur *even if the zero-length object is not actually > accessed*/is used in a perfectly correct manner, i.e. it's perfectly > legal in base R to define `m <- numeric(0)` or `m <- matrix(nrow = 0, > ncol = 0)`, whereas doing the

Dear r-devel readers, I have a pretty deep problem with package loading and unloading in the development version of the lme4 package <https://github.com/lme4/lme4>; it's not boiled down to a properly minimal example yet (this has been difficult), but I am posting anyway in the hopes that someone has ideas about how to proceed farther, since I'm nearly stumped. Apologies in advance

Dear list, Given a linear mixed model (from lme4) I want to 1) first change the input dataset and then 2) change the model formula. I want this to happen in a function call; Please see below. Options 1) and 2) below work whereas 3) fails with the message > foo() Error in is.data.frame(data) : object 'beets2' not found Question: What is it one must to in case 3) to have R look

On 6 June 2023 at 23:33, Johan Andresen wrote: | Cheers - my response mixes up the order of things: | | The suggested apt way INSTALLED INTERFLEX nicely. Lesson learned: install | dependencies from apt if a package/library isn't in apt search. | | Yes I also tried install.packages('interflex'). RStudio console complained | about the same packages like this: | ERROR: dependency

Cheers - my response mixes up the order of things: The suggested apt way INSTALLED INTERFLEX nicely. Lesson learned: install dependencies from apt if a package/library isn't in apt search. Yes I also tried install.packages('interflex'). RStudio console complained about the same packages like this: ERROR: dependency 'xyz' is not available for package ''abc" *

Pues parece que el problema si es de lme4, cuya versión 1.0-4 se publicó en septiembre de este año. En la página en cran del paquete pone "The core computational algorithms are implemented using the Eigen C++ library for numerical linear algebra and RcppEigen "glue" " . El tema es que al utilizar esta versión junto con la librería boot, el tiempo de cálculo se incrementa

Hi Paul, We've been through this process ourselves for the Revolution R Open project. There are a number of pitfalls to avoid, but you can take a look at how we achieved it in the build scripts at: https://github.com/RevolutionAnalytics/RRO There are also some very useful notes in the R Installation guide: https://cran.r-project.org/doc/manuals/r-release/R-admin.html#BLAS Most packages do

Dear R-devel: The Cluster administrators at KU got enthusiastic about testing R-3.2.2 with Intel MKL when I asked for some BLAS integration. Below I forward a performance report, which is encouraging, and thought you would like to know the numbers. Appears to my untrained eye there are some extraordinary speedups on Cholesky decomposition, determinants, and matrix inversion. They had

I just dumped Vista off a laptop and installed Ubuntu 10.10 (latest release) as the single operating system. I did all of the updates and then installed emacs and ess. Next I installed R by following the the usual instructions on the CRAN site. At this point all is working I am now in the process of installing the packages that I normally have installed. I am having a problem with the LAPACK

We have released to CRAN a new version of the (recommended) package Matrix, and of package lme4 yesterday. Anyone who gets the new version of Matrix *MUST* re-install lme4 -- if (s)he is using lme4 at all. Technical details about that further below. The fact that yesterday's version number of Matrix is 0.9995875-2, indicates that Matrix' version is indeed approaching 1.0 (*), and

We have released to CRAN a new version of the (recommended) package Matrix, and of package lme4 yesterday. Anyone who gets the new version of Matrix *MUST* re-install lme4 -- if (s)he is using lme4 at all. Technical details about that further below. The fact that yesterday's version number of Matrix is 0.9995875-2, indicates that Matrix' version is indeed approaching 1.0 (*), and

This is a summary and extension of the thread "GLMM (lme4) vs. glmmPQL output" http://maths.newcastle.edu.au/~rking/R/help/04/01/0180.html In the new revision (#Version: 0.4-7) of lme4 the standard errors are close to those of the 4 other methods. Thanks to Douglas Bates, Saikat DebRoy for the revision, and to G?ran Brostr?m who run a simulation. In response to my first posting, Prof.

? Sat, 15 Jun 2024 02:04:31 +0000 "Therneau, Terry M., Ph.D. via R-devel" <r-devel at r-project.org> ?????: > other attached packages: > [1] lme4_1.1-35.1 Matrix_1.7-0 I see you have a new Matrix (1.7-0 from 2024-04-26 with a new ABI) but an older lme4 (1.1-35.1 from 2023-11-05). I reproduced the crash and the giant backtrace by first installing latest lme4 and then

Hi all, I have installed R on SUSE 11.1 and if I tried to add some packages e.g. lme4 I got a message: ________________________________________________________________________________________ * installing *source* package ?lme4? ... ** libs gcc -std=gnu99 -I/usr/lib64/R/include -I/usr/local/include -I"/usr/lib64/R/library/Matrix/include"