similar to: JOB - PhD position: applying HPC in cancer research

Dear all, The CRUK MI have multiple positions in and around bioinformatics, biostatistics and computational biology. These range from HPC and mathematical programming, through biostatistics and biomarkers, to computational biology and bioinformatics. Focuses include single cell genomics and personalised medicine in lung and prostate cancer. For full details, please visit our website at:

Deadline - 6th February 2015 Five PhD awards to begin September 2015, (one including an additional MRes award in Urban Sustainability and Resilience in collaboration with UCL?s Centre for Urban Sustainability and Resilience), are available for work associated with the Economic and Social Research Council (ESRC) funded Consumer Data Research Centre, based at University College London (UCL) and the

Hi, I've got a quick question about file permissions and packages... I'm creating my own package, and am having problems with its vignette not being seen when I install it into R... As I understand it, the permissions of the source tree should be as follows: o Directories - drwxrwxr-- o Files - -rw-r--r-- Everything builds and runs through 'R CMD check' fine with

Hi, Forgive a very basic question... I need to take two lists-of-lists, and apply a function to each pair of elements in the lists to return a single list... For example l1 <- list(1:5,6:10,2:15) l2 <- list(1:8,4:12,1:19,4:20) I could easily do an lapply across each of them, but is there a function that does a sort-of pairwise-apply across both together? Does anybody know of a good

Hi, I've got a quick question about what happens when indexing into matrices with a single column. I was wondering if anyone can help ... For example: > x <- matrix(1:10) > y <- cbind(x,x) > x[4:6,] [1] 4 5 6 > y[4:6,] [,1] [,2] [1,] 4 4 [2,] 5 5 [3,] 6 6 > class(x[4:6,]) [1] "integer" > class(y[4:6,]) [1] "matrix" It seems that R

>> I have a function that applies a wilcoxon test to 12 sets of about a quarter of a million pairs > ... and let me guess: everything is significiant to an almost arbitrary > value of \alpha? :-) For each of quarter of a million sets, I do a wilcoxon between two pairs each containing twenty numbers... I do this 12 times... > > (and takes about 3 hours). I've replaced the

Dear R-devel, I think I've found a bug - the alpha transparency doesn't work when plotting lines with xpd = TRUE. #works plot(1:20, col="#1874CD", xpd=T, type="l") #works plot(1:20, col="#1874CD50", xpd=F, type="l") #doesn't work plot(1:20, col="#1874CD50", xpd=T, type="l") Thank you. Jim [[alternative HTML version

Hi, I decided to upgrade to 1.8 today... :-) Anyway, we are writing our own package that is dependent on a bioconductor library - 'affy'. I've checked and when I fire up R, library(affy) behaves as expected... so it all seems to be installed and OK... In the DESCRIPTION file in my package source I have the line: Depends: affy When I run R CMD check simpleaffy I get to: ... *

Jenner lab, University College London Our laboratory uses genomics and biochemical techniques to identify how transcription factors, chromatin modifiers and non-coding RNAs act to regulate cell differentiation. Our research has led to the characterisation of a class of short RNAs transcribed from polycomb target genes that interact with polycomb repressive complex-2 (Kanhere et al., Mol Cell

Hi, I have a string representing an environment: "bob" And an environment > bob <environment: 0x3901234ac> How do write a function that takes the string and returns the environment? Crispin -------------------------------------------------------- This email is confidential and intended solely for the use o...{{dropped}}

Begin forwarded message: > From: Barry Leiba <barryleiba at computer.org> > Date: 20. marraskuuta 2012 2.44.51 UTC+2.00 > To: imap5 at ietf.org, imapext at ietf.org, imap-protocol at u.washington.edu, imap-use at u.washington.edu > Subject: [imapext] News about Mark Crispin > Reply-To: imap5 at ietf.org > > Everyone here knows Mark Crispin -- or at least knows who he

Rowland said: >> Can you point me to a Release Changes note that says explicitly that Winbind is now required or that mapping of AD users to local unix accounts has been removed? >> >> Crispin >Yes, see here: > https://wiki.samba.org/index.php/Samba_4.8_Features_added/changed#Domain_member_setups_require_winbindd > >Samba did a lot of things back in the NT4-style

Dear All, We are seeking a computational research scientist interested in studying the roles of non-coding RNAs in cancer. The successful applicant will join the Cancer Research UK RNA Biology Group at the Cancer Research UK Manchester Institute (www.cruk.manchester.ac.uk). Located in Manchester UK, the Cancer Research UK Manchester Institute is a centre for excellence in cancer research. We

Thanks - it is indeed the first '.' that's the problem... Crispin > -----Original Message----- > From: Liaw, Andy [mailto:andy_liaw at merck.com] > Sent: 07 October 2003 15:21 > To: Crispin Miller > Subject: RE: [R] .First.lib doesn't appear to be running after calling > lib rary() > > > I put .First.lib in the file "zzz.R", and it works for

Folks, I've asked this question on the FreeNAS forum but there are no ideas there as it looks like it's a NUT issue. Original question: https://forums.freenas.org/index.php?threads/apc-ups-reporting-wrong-input-voltage.60888/ the nut driver is reporting the wrong input voltage. I am in the UK, 230V but it's reporting circa 108. If I connect it to the laptop and run powerchute it

There seems to be a protocol mismatch between eudora and dovecot when using pop. The login interchange with, for example, mozilla, is as follows: MO: [connects] DC: +OK dovecot ready. MO: CAPA DC: +OK DC: CAPA DC: TOP DC: USER DC: UIDL DC: RESP-CODES DC: STLS DC: SASL PLAIN DC: . MO: USER yyy DC: +OK MO: PASS xxxxxxxx DC: +OK Logged in. But with eudora, with apparently equivalent

Hi, Does anyone have any advice on speeding up R functions (short of re-implementing them in C :-) )? I have a function that applies a wilcoxon test to 12 sets of about a quarter of a million pairs (and takes about 3 hours). I've replaced the inner loop I had originally with a function call via mapply, and also considered different approximations of the wilcoxon, rather than that which is

Hi, Does anyone know whether it is possible to construct a colour for plotting with an alpha value as well as simply specifying rgb values? Crispin -------------------------------------------------------- This email is confidential and intended solely for the use o...{{dropped}}

Hi Everyone, Good Day! I wanna to add to my blog a counter for displaying, how many times was my website visited. I would like to solve it through ruby (not GA or something like that). Is available any gem that do this task (also with checking IP address,the time of latest visited and visited count). Please Advice. Thank You. -- You received this message because you are subscribed to the

I would be surprised if someone hasn''t encountered this already, but I haven''t found any discussion of the nature of this problem. I run RehHat 5.0. If a user makes a mistake in the login process such as the following: login: mistake password: xxx Login incorrect! login: username password xxxx bash$ a ps will show, among other things, 2333 /bin/login --mistake. Since