Displaying 20 results from an estimated 1000 matches similar to: "shell function in R"
2008 Jul 26
1
Can't get the correct order from melt.data.frame of reshape library.
Simple illustration,
> df3 <- data.frame(id=c(3,2,1,4), age=c(40,50,60,50), dose1=c(1,2,1,2), dose2=c(2,1,2,1), dose4=c(3,3,3,3))> df3 id age dose1 dose2 dose41 3 40 1 2 32 2 50 2 1 33 1 60 1 2 34 4 50 2 1 3> melt.data.frame(df3, id.var=1:2, na.rm=T) id age variable value1 3 40 dose1 12 2 50 dose1 23 1
2007 Feb 09
0
R/S-PLUS Pharmaceutical Consultant - Mango Solutions (UK)
Mango Solutions, providers of S-PLUS and R consulting, development and
Training Services, are looking for consultants to join their UK-based
technical team. We are looking for highly motivated individuals to work
in a customer-focused environment.
This is a unique opportunity to develop within a dynamic company which
has been expanding rapidly and profitably since it's inception in 2002.
2009 Aug 05
1
Starting NONMEM (nmfe6) from R
Hello,
I have made an R script that prepares a NONMEM dataset and I would like
to start the NONMEM run right after the dataset is ready.
I am using windows XP, R 2.9.1 and NONMEM 6.
I have prepared a run.bat file that looks like this:
----------------------------------------
call K:\nmvi\NMdirectories.bat
call K:\nmvi\nmfe6 "path\control.txt" "path\output.txt"
2008 Nov 26
1
Request for Assistance in R with NonMem
Hi
I am having some problems running a covariate analysis with my
colleage using R with the NonMem program we are using for a graduate
school project. R and NonMem run fine without adding in the
covariates, but the program is giving us a problem when the covariate
analysis is added. We think the problem is with the R code to run the
covariate data analysis. We have the control stream, R code
2009 Jul 20
0
Vacancy - PhD / Post-doctoral position at the University of Leiden.
TOP Institute Pharma (TI Pharma) has granted our proposal to set up a
mechanism-based PKPD modelling platform. This platform focuses on the
transfer of knowledge from academia to the pharmaceutical industry and is
a collaborative effort of four excellent academic institutes and six
leading global pharmaceutical industries. Unique to this platform is the
availability of shared databases on
2008 Mar 28
0
Vacancy Principal Postdoc PK-PD modeling The Netherlands
________________________________
Principal Post-Doctoral Fellow
PKPD modelling platform (full time)
Leiden University, Leiden, The Netherlands
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Job description
________________________________
TOP Institute Pharma (TI Pharma) has granted our proposal to set up a
mechanism-based PK-PD modelling platform. This platform focuses on the
transfer of
2008 Mar 28
0
Vacancy Post Doc PK-PD modeling the Netherlands
Post-Doctoral Fellowship
Modelling of Cardiovascular Safety (full time)
Leiden University, Leiden, The Netherlands
<javascript:doredirect();>
Job description
TOP Institute Pharma (TI Pharma) has granted our proposal to set up a
mechanism-based PKPD modelling platform. This platform focuses on the
transfer of knowledge from academia to the pharmaceutical industry and
is a
2015 Mar 17
0
Postdoc in Pharmacometrics at the University of Cape Town
Dear all,
at the Division of Clinical Pharmacology at the University of Cape Town
(South Africa) we are looking for highly motivated science/engineering
PhD graduates to join our pharmacometrics group as a post-doctoral fellow.
Pharmacometrics is an emerging discipline that applies mathematical
modelling and simulation to pharmacology, aiding the interpretation of
data from clinical trials,
2008 Nov 10
0
Postdoc Positions Available at Leiden University The Netherlands
Two Postdoctoral fellows (fulltime)
Leiden University, Leiden, The Netherlands
Job description
________________________________________
TOP Institute Pharma (TI Pharma) has granted our proposal to set up a
mechanism-based PK-PD modelling platform. This platform focuses on the
transfer of knowledge from academia to the pharmaceutical industry and
is a collaborative effort of
2012 Jan 11
6
Generating unque patient IDs
Dear group,
I am trying to prepare a NONMEM friendly dataset for population PK
analysis. My patient IDs are 10 digit long and NONMEM is losing precison
and rouding the last couple of digits. I need to generate unique Patient
IDs fromt he current 10-digit IDs. Ihave total 250 subjects so I
appreciate if anybody can suggest me a way to code this in R.
Regards,
Ayyappa
[[alternative HTML
2008 Oct 28
3
Dose Profile
Hi Everyone,
I have data in a long format e.g. there is one row per patient but each
follow-up appointment is included in the row. So, a snippet of the data
looks like this:
TrialNo Drug Sex Rand Adate1 Date1 Dose1 Time1 Adate2 Date2 Dose2
Time2 B1001029 LTG M 15719 30/04/2003 15825 150 106 29/08/2003 15946 200
227 B1117003 LTG M 15734 30/04/2003 15825 200 91 03/09/2003 15951 250 217
2010 Dec 30
1
Different results in glm() probit model using vector vs. two-column matrix response
Hi - I am fitting a probit model using glm(), and the deviance and residual degrees of freedom are different depending on whether I use a binary response vector of length 80 or a two-column matrix response (10 rows) with the number of success and failures in each column. I would think that these would be just two different ways of specifying the same model, but this does not appear to be the case.
2010 Oct 20
1
lme with log-normal distribution of parameters
Dear R-users,
Do you know if we can use the function lme in R for log-normal
distribution of parameters as used in Nonmem ?
theta=theta0*exp(eta)
In our model, the parameters follow the log-normal distribution so it's
not reasonable to deal with normal distribution which gives us negative
values in simulation
Thanks for your help,
Thu
[[alternative HTML version deleted]]
2012 Aug 02
2
Help on merging without a common variable
Dear All,
I want to create a dataset for a NONMEM simulation. I have a dataframe with
individual PK parameters and want to create a dosing sceinario in a second
dataframe. I want to merge them both so that every individiual's PK
parameters are combined with the dosing scenario into one. I do not have a
common variable to merge and cbind is giving error that lengths are
different. I
2005 Mar 22
1
Writing R documentation
Greetings,
I used latex type code in my Rd files.
The pdf version using
R CMD Rd2dvi --output=PKtools.pdf --pdf --title="PKtools" PKtools man
came out quite nice.
However, my current HTML version does not tex the latex so there is
latex code in the files and looks bad.
example problem code:
AIC$_c$
or
\begin{itemize}
\item NLME:
\begin{itemize}
\item population level:
2011 Apr 16
5
how to get the plot like this by R?
Dear R users,
I see a graph (shown athttps://cid-c486ebef16722625.photos.live.com/self.aspx/%e6%88%91%e5%96%9c%e6%ac%a2%e7%9a%84%e8%8a%b1/untitled.bmp) in a published paper, which is very informative and clear. But I don't know what type the graph is.
It looks like a sactter plot but has the points with the same y values are seperate..
I really aprreciate it if someone can tell
2011 Feb 26
0
rsync Digest, Vol 96, Issue 2
I THINK YOUR A VERY SAD BUNCH OF LIFES WAISTERS
On Wed, Dec 8, 2010 at 7:00 PM, <rsync-request at lists.samba.org> wrote:
> Send rsync mailing list submissions to
> ? ? ? ?rsync at lists.samba.org
>
> To subscribe or unsubscribe via the World Wide Web, visit
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> or, via email, send a message with subject or body
2010 Dec 08
3
DO NOT REPLY [Bug 7854] New: Abysmal sparse file performance
https://bugzilla.samba.org/show_bug.cgi?id=7854
Summary: Abysmal sparse file performance
Product: rsync
Version: 3.0.7
Platform: x86
OS/Version: FreeBSD
Status: NEW
Severity: major
Priority: P3
Component: core
AssignedTo: wayned at samba.org
ReportedBy: grarpamp at gmail.com
2011 Mar 07
0
[Announce] Samba 3.5.8 Available for Download
===================================================================
"Food is for eating, and good food is to be
enjoyed... I think food is, actually, very
beautiful in itself."
Delia Smith
==================================================================
Release Announcements
=====================
This is the latest stable release of Samba 3.5.
Major enhancements in
2011 Mar 07
0
[Announce] Samba 3.5.8 Available for Download
===================================================================
"Food is for eating, and good food is to be
enjoyed... I think food is, actually, very
beautiful in itself."
Delia Smith
==================================================================
Release Announcements
=====================
This is the latest stable release of Samba 3.5.
Major enhancements in