similar to: how to include --configure-args= in R CMD INSTALL

I have been trying to install RMySQL on Windows 7 following the procedure at: http://biostat.mc.vanderbilt.edu/wiki/Main/RMySQL I think I have properly installed RTools and created a proper Renviron.site file saying: MYSQL_HOME="C:/Program Files/MySQL/MySQL Server 5.5" When I try to install the packages from source, I get warnings that suggest I'm still not quite "with the

i m installing RMySQL under windows -7 64bit, i have wamp server(which has mysql5.5.16) i have given MYSQL_HOME path in environment variable as MYSQL_HOME=C:\wamp\bin\mysql\mysql5.5.16\bin , & also create Renviron.site file in C:\Program Files\R\R-2.15.0\etc giving MYSQL_HOME=C:/wamp/bin/mysql/mysql5.5.16/bin as path i install c connector "MySQL Connector C 6.0.2" version

Hi, On a Win7 64 bit, I have installed: *R-15.0 and I am running it in 64bits *Rtools215.exe*MySQL 5.5.23 64bits My PATH start with D:\BenSave\Rtools\bin;D:\BenSave\Rtools\MinGW64\bin;D:\BenSave\R\R-2.15.0\bin;D:\BenSave\Rtools\MinGW\bin;D:\BenSave\Rtools\gcc-4.6.3\bin; Note that I place MinGW64\bin has I want the package in 64 bits, so just in case it helps... To install RMySQL 64 bits, I

when i am installing package manually (using below command) i get error about cygwin as, > install.packages("C:\\Users\\trendwise\\Downloads\\RMySQL_0.9-3.tar.gz",lib=getOption("lib"), > repos = NULL, type="source") error:------> Installing package(s) into ?C:/Users/trendwise/Documents/R/win-library/2.15? (as ?lib? is unspecified) * installing *source*

Dear All, I have been trying to compile a package for windows that we have written. Since R version 3.0.0 the package doesn't compile any more. (On Linux the package compiles without errors). The error specifically says: gcc -m32 -I"C:/PROGRA~1/R/R-30~1.0/include" -DNDEBUG -I"d:/RCompile/CRANpkg/extralibs64/local/include" -O3 -Wall -std=gnu99 -mtune=core2 -c

Hi, I am trying to compile C++ with R and I am coming up against - what I believe - is a linker configuration issue. For example, using has_develop() gives the following message... > has_devel() "C:/PROGRA~1/R/R-30~1.2/bin/i386/R" --vanilla CMD SHLIB foo.c gcc -m32 -I"C:/PROGRA~1/R/R-30~1.2/include" -DNDEBUG -I"d:/RCompile/CRANpkg/extralibs64/local/include"

Hi, After uninstalling Rtools 2.14.0, I have installed the latest version of Rtools 2.15.0 which gives the two folders C:\Rtools\bin C:\Rtools\gcc-4.6.3 R is installed in the directory C:\R\R-2.15.0 I have set the Environment Variable PATH=c:\Rtools\bin;c:\Rtools\gcc-4.6.3\bin;c:\R\R-2.15.0\bin;<others> I am trying to install a custom package (BMEA_0.2.1) which is exactly

i m installing pkg but get error like this > install.packages("RMySQL") Installing package(s) into ?/home/trendwise/R/x86_64-pc-linux-gnu-library/2.13? (as ?lib? is unspecified) trying URL 'http://ftp.iitm.ac.in/cran/src/contrib/RMySQL_0.9-3.tar.gz' Content type 'application/x-gzip' length 165363 bytes (161 Kb) opened URL

I have developed an R package that works under Win32, but when I attempt to build it on Win64, I get ERROR: loading failed for 'x64' More precisely, I developed and tested the package under Win32 and it works. But when I move to a 64 bit Windows 7 (Home Premium) system, and attempt to build both 32 bit and 64 bit packages, the 32 bit package seems to build, but the 64 bit build

I am running into a wall getting my system to work with rcpp and inline. Following Dirk's advice on stackoverflow, I hope someone is able to help me. My steps were to install MinGW 32 bit first, then installing Rtools, I disabled MinGW's entry in the PATH. I am trying to get the following code to work: library(Rcpp) library(inline) body <- ' NumericVector xx(x); return wrap(

I am trying to build a dll writen in C to be called by R. Interestingly, when I set the global environment variable PATH to be "c:\Rtools\bin;C:\Rtools\gcc-4.6.3;C:\Program Files\R\R-3.1.1\bin\*i386*;" and I typed "RCMD SHLIB Permutation.c" in Cygwin, the dll was compiled and I can sucessfully call functions after I had loaded it into 32 bits R via .Call. However, now I want

Hello R, could you tell me please, how to fix this issue? There is installed RStudio-2.15.2 and the next steps where follow but the message appears: http://cran.r-project.org/web/packages/RMySQL/INSTALL): > > 1. Download the RMySQL_0.9.tar.gz file to the folder C:\Program > Files\R\R-2.15.1\bin\x64 > 2. Open a Windows command line, and change directory to that folder > 3.

I have a mysql database I installed on my Ubuntu server, and I'm trying to figure out how to access and analyze it from a Win XP machine running R 2.15.1. I thought that RMySQL was the way to go. (Is there an easier way?) I tried to follow the instructions at http://www.r-bloggers.com/installing-the-rmysql-package-on-windows-7/ so I installed mysql-installer-community-5.5.27.0.msi, then set

I had installed R and MySQL ,then I input : > install.packages('RMySQL',type='source') show the message below, Why? Why shows "ERROR: configuration failed for package 'RMySQL'"? ??URL?http://mirrors.xmu.edu.cn/CRAN/src/contrib/RMySQL_0.9-3.tar.gz' Content type 'application/x-gzip' length 165363 bytes (161 Kb) ???URL downloaded 161 Kb *

I am facing issues while installing RMySQL package on windows(32 bit) installation of R-Project. I am getting the following warning messages. Warning messages: 1: running command 'C:/PROGRA~1/R/R-213~1.2/bin/i386/R CMD INSTALL -l "C:/Program Files/R/R-2.13.2/library" D:\DOCUME~1\nagga002\LOCALS~1\Temp\RtmpLZndlE/downloaded_packages/RMySQL_0.9-3.tar.gz' had status 1 2: In

I am attempting to analyze Affymetrix exonchip data using the exon map package. I have installed this package but have had problems installing the associated programs, specifically RMySQL since no windows binary exists. I have followed the directions for compiling the package as found on - http://biostat.mc.vanderbilt.edu/wiki/Main/RMySQL - but still have an error when executing the

Hi,? I have a Fortran 77 subroutine (dll). On windows XP, how ?would I 'debug it(Fortran) within R' using gdb? This is how I made it. ---------------------- R CMD SHLIB main.f gfortran -m32 ? ? -O3 ?-mtune=core2 -c main.f -o main.o gcc -m32 -shared -s -static-libgcc -o main.dll tmp.def main.o -Ld:/RCompile/CRANpkg/extralibs64/local/lib/i386 -Ld:/RCompile/CRANpkg/extralibs64/local/lib

Hello: What do I need to do to compile R packages (especially RMySQL) for the 64-bit version of R 2.12.0 under Vista_x64? I upgraded to "Rtools212.exe" yesterday but immediately got errors from "R CMD check RMySQL_0.7-5.tar.gz". After the first error, I installed it a second time, then got "undefined reference to" roughly 50 different names beginning

I want to connect R with HTML/PHP pages to take input from user,do some statistical processing on it & show results to HTML page again. I search on net,i got Rserve package,but examples are mainly for java langaure & not for PHP i am wondering how to connect it to PHP-Apache-MySQL Is there any good tutorial/video which will tell me how to do that ? At least tell me logical way how to

Hi, Has something changed regarding the useDynLib in the NAMESPACE file in packages? I've written a package that works in e.g. 2.12/2.13 but simply cannot find the dynamic library under windows. The version on CRAN is older than the one I'm talking about and depends on a newer version of R but I want to make the package available to people with older versions. >