similar to: mgcv: Extract random effects from gam model

Hi R-Users I wrote 1 week ago asking about a message that appears when I try run dyn.load. I'm trying to do an example in C code from "Writing R Extension" to learn how to do it. I have R 2.0.0, Rtools, Perl and MinGW as describe in http://www.murdoch-sutherland.com/Rtools/ with path sets. When I use C:\R\rw2000\bin>RCMD SHLIB -o C:/dev-cpp/teste.dll

Hi, I am not sure if this is a bug and I apologize if it is something I didn't read carefully in the R extension manual. My initial search on the R help and R devel list archive didn't find useful information. I am using .Call (as written in the R extension manual) for the C code and have found that the .Call didn't release the memory claimed by allocVector. Even after applying

Hi, I am not sure if this is a bug and I apologize if it is something I didn't read carefully in the R extension manual. My initial search on the R help and R devel list archive didn't find useful information. I am using .Call (as written in the R extension manual) for the C code and have found that the .Call didn't release the memory claimed by allocVector. Even after applying

Hi! I am studying C language to run with R 2.0.0. My system (Windows ME /BR) is configured to run RCMD ( I have installed ActivePerl, Rtools and MinGW as indicated in http://www.murdoch-sutherland.com/Rtools/ an with correct path). I would like run the coded write below named conv.c (Example from "Write R Extension") : #include <R.h> #include <Rinternals.h>

Hi everyone, I ran a binomial GAM consisting of a tensor product of two continuous variables, a continuous parametric term and crossed random intercepts on a data set with 13,042 rows. When trying to plot the tensor product with vis.gam(), I get the following error message: Error in persp.default(m1, m2, z, col = col, zlim = c(min.z, max.z), xlab = view[1], : invalid 'z' limits In

Hello, Can anyone help on gsub() in R? I have a string like something below, and wanted to delete all the strings with leading backslash, including "\xa0On", "\023, "\xab", and many others. How should I write a regular expression pattern in gsub()? I don't care how many characters following backslash. txt <- "Is This Thing\xa0On? http://bit.ly/jAbKem

I'm continuing my work on finding speedups in generalized inverse calculations in some simulations. It leads me back to .C and .Call, and some questions I've never been able to answer for myself. It may be I can push some calculations to LAPACK in or C BLAS, that's why I realized again I don't understand the call by reference or value semantics of .Call Why aren't users of

Hi, everyone, I am just trying to use Rcpp in my computer, and I would like to try a simple example from website, but R keeps reporting me error. I am using Windows XP, and has installed Rtools and GSI. Here is the response: > src = ' + Rcpp::NumericVector xa(a); + Rcpp::NumericVector xb(b); + int n_xa = xa.size(); + int n_xb = xb.size(); + + Rcpp::NumericVector xab(n_xa + n_xb - 1);

Hello, I am trying to update the mgcv package on my Linux box and I keep getting an "Out of memory!" error. Does anyone know of a fix for this? Below is a snippet of the message that I keep getting: Thank you. Geoff ** R ** inst ** preparing package for lazy loading ** help *** installing help indices >>> Building/Updating help pages for package 'mgcv' Formats:

Hi all, >From the manpage of rsync, I can see the following descriptions: --inplace The option implies --partial (since an interrupted transfer does not delete the file) So I do the following testings on the `--inplace' and `--partial' for resuming a file with the following steps: 1- rsync ftp.cn.debian.org::debian/dists/wheezy/main/binary-amd64/

Hello, We have a nodejs app which is injecting first boot scripts using virt-customize however the exact same commands are working when triggered manually. Here is the debug output of the commands Regards, Peter [ 0.0] Examining the guest ... libguestfs: trace: set_network true libguestfs: trace: set_network = 0 libguestfs: trace: add_drive

Everyone, I have a mail server running CentOS release 6.3 (Final) with 2.6.32-279.22.1.el6.i686 kernel that is reporting errors to me pertaining dovecot. I have appended the error message to this note. There is only one user that appears to generate this message, and it is generated to me by way of e-mail without a perceptible problem to the user which is not me. This particular user had an

Before this patch, Python would segfault once you pass a non-string key or value to node_set_value. It was also not possible to set bytes on Python 3 as Unicode was assumed (Python 2 was not affected by this). This patch fixes recognition of bytes for Python 3, but in addition it recognizes ints (includes 'long' in Python 2) for DWORD (LE + BE) and QWORDs. For this purpose, a new field

Guys, Dovecot 1.0.15 [1], just built the latest antispam-plugin 1.2 (tarball) for testing, mailtrain backend for SA integration. Both built from custom spec files. The mail that is being trained is different than its respective source in the mbox file. The trained one shows added, trailing carriage-return chars for all headers, which are not in the headers in the mbox file. This breaks sa-learn

I recently had some scary experience with the Inbox being stored in the default /var/mail dir, and I believe it would be a better idea to keep the Inbox next to any other mail in the users $HOME. mail_location = mbox:~/.mail:INBOX=~/.mail/INBOX This is what I used for a quick test, and actually would love to use in production soon. Based on the test, it just does exactly what I want. :)

Greetings, I have tried numerous ways to set the LIMIT_PLAYAUDIO_CALLER and LIMIT_PLAYAUDIO_CALLEE variables with no success. The default parameters never change. Has anyone had success changing the defaults? If so, how did you do it? Thanks, vcomp -------------- next part -------------- An HTML attachment was scrubbed... URL:

Dear list, does anybody know whether there is a way to easily retrieve the so called "partial residuals" of a gam fit with package mgcv? The partial residuals are the residuals you would get if you would "leave out" a particular predictor and are the dots in the plots created by plot(gam.object,residuals=TRUE) residuals.gam() gives me whole model residuals and

Dear users, I am trying to show the equation (including coefficients from the model estimates) for a gam model but do not understand how to. Slide 7 from one of the authors presentations (gam-theory.pdf URL: http://people.bath.ac.uk/sw283/mgcv/) shows a general equation log{E(yi )} = ?+ ?xi + f (zi ) . What I would like to do is put my model coefficients and present the equation used. I am an

Dear R-Helpers, I posted two days ago on testing significance of random effects in mgcv, but realize I did not make my overall purpose clear. I have a series of N short time series, where N might range from 3-10 and short means a median of 20 time points. The sample data below (PCP) has N = 4 cases with 9, 13, 16 and 16 observations over time respectively. The data set contains four

Dear community, I encountered a very disturbing phenomenon today: When I try to fit any gam() with mgcv R aborts. I could not find any post regarding this in google, which mades in even more strange. I am using the latest Ubuntu, latest R and latest mgcv everything up to date. The crash occured too with the last mgcv 1.7-11. This is the output from the R shell: <pre> R version 2.14.0