similar to: R books: self-serving question

In Henric's recent post, he included this output: @BOOK{R:Harrell:2001, AUTHOR = {Frank E. Harrell}, TITLE = {Regression Modeling Strategies, with Applications to Linear Models, Survival Analysis and Logistic Regression}, PUBLISHER = {Springer}, YEAR = 2001, NOTE = {ISBN 0-387-95232-2}, URL =

I have two versions of a bibtex database which have gotten badly out of sync. I need to find find all the entries in bib2 which are not contained in bib1, according to their bibtex keys. But I can't figure out how to extract a list of the bibentry keys in these databases. A minor question: Is there someway to prevent read.bib from ignoring entries that do not contain all required fields?

Back in 2010 I raised this issue, and there was some discussion, https://stat.ethz.ch/pipermail/r-devel/2010-November/058987.html The goal, then, as now is to have a way to produce a bibtex-clean .bib file (i.e., not requiring manual editing except in unusual circumstances) reflecting installed packages for use in writing where one often needs/wants to cite all packages used in a given

Dear Colleagues, I would like to provide a CITATION file for my package nat.nblast [1]. I have the correct citation in BibTeX format [2]. How can I convert this BibTeX to the format needed by R for a package CITATION file (I have a lot of other packages needing citations ...). I think what I need is the opposite of RefManageR::toBiblatex [3]. This seems like it should be a common need, so I

== Summary == * Problem: BibTeX entries extracted from R packages via citation() require too much manual editing to be of general use. * Proposal: Date: fields should be made mandatory in package DESCRIPTION files, perhaps beginning with warnings from R CMD check * Proposal: Package authors should be encouraged to use a (new) Contributors: field in the DESCRIPTION file rather than packing all

Dear all, i am new in R. I am writing a review paper about batteries. However, i am interested in analyzing all the papers by keywords, author, references and year. This could be done by "refviz" a software, which is only running on windows machines and which is not free. So my question to you is, is it somehow possible to write a script that can do all of this work? And if yes, with

Hello. R-devel, r61697. I am having difficulty interpreting section 1.4 "Writing package vignettes" of the R-exts manual. Specifically, I want to use system.file() in some of my packages to locate a bib file, uncertainty.bib, which is part of the emulator package. I only want to maintain a single .bib file. R-exts says: "All other files needed to re-make the vignette PDFs (such

Hi is there an easy and fast way, to generate a BibTeX file of all installed / loaded packages and R? I know about toBibtex(citation()) to extract the BibTeX for a single package, but how can I generate a file containg citations for all installed / loaded packages? Cheers, Rainer -- NEW GERMAN FAX NUMBER!!! Rainer M. Krug, PhD (Conservation Ecology, SUN), MSc (Conservation Biology, UCT),

Dear all, Is there an elegant way to add citations of packages when using Sweave? Ideally I'd like a function which creates a Bibtex-file with the packagenames as keys. The idea is to use \cite{packagename} or \cite{R} in LaTeX. I know you can get the Bibtex entry with toBibtex(citation("packagename")). But after updating R or a package one needs to update the bib-file too. When

Hello, I have the following makefile. The problem is that the bibliography doesn t work. Any help would be appreciated! I really don t don t what to do..:-( # The sources of the report (tex, Rnw and other files (e.g. bib, idx)) TEX_CMPS = Report problem RNW_CMPS = prop1 prop2 ExeExps OTHER = Report.bib # The name of the report to produce all: Report.pdf code: $(RNW_CMPS:=.R) clean: rm

Dear R-devel, Question: How can I get Sweave to recognize that the \thebibliography section is already created and generate the vignette pdf with a single pass? Or is there a way to let R CMD build know that Sweave needs to be run twice? If (1) is not possible, any suggestions how to auto-generate a crude generic bibtex .bib file from my existing document? Background: I maintain

Dear List, While trying to define a customised CITATION file for a package, following R-exts, I realised that if I use only one 'citEntry' I got both a text description and a BibTex entry for the package, as for the 'nlme' package: -------------------------- citation('nlme') To cite package 'nlme' in publications use: Jose Pinheiro, Douglas Bates, Saikat

Dear all, I'm a big fan and happy user of the Sweave package for routine reporting. From inside a .Rnw script, I'd like to produce the references in bibtex format for each package loaded in the environment, write them in a .bib file and load them back from the \bibliography{bibliography} statement. Is this feasible? Any help would be greatly appreciated! Thanks in advance, Paolo

I know citation() gives the R citation to be used in publications. Has anyone put this into endnote nicely? I'm not very experienced with endnote, and the way I have it at the momeny the 'R Development Core Team' becomes R. D. C. T. etc. Cheers.

I am having some trouble getting reftex, in particular the bibtex related features, to work properly in xemacs when editing text in Sweave files. I have added (defun Rnw-mode () (noweb-mode) (if (fboundp 'R-mode) (setq noweb-default-code-mode 'R-mode))) (add-to-list 'auto-mode-alist '("\\.Rnw\\'" . Rnw-mode)) (add-to-list 'auto-mode-alist

On 07/09/2017 2:04 PM, Duncan Murdoch wrote: > On 07/09/2017 10:11 AM, Thierry Onkelinx wrote: >> Dear Duncan, >> >> Thanks for chiming in. Could you explain how you set debug() on >> post_processor()? I've tried adding debug(post_processor) to >> rsos_article() or adding debug(post_processor) when after post_processor >> was defined in the debugger.

Dear List, I am building a R package which collects ecological data about plant species from both remote (web) databases and locally stored rda files (datasets): these "local rda files" are derived from publicly available databases for which no "official" licenses are provided; I was told by the creators of these databases that users can use such data provided that the

Hello, I'm seeing three different vignette-related errors with recent versions of R-3.0.0 alpha. First, with the package BitSeq (http://bioconductor.org/packages/2.12/bioc/html/BitSeq.html), I get the following when trying to build the package: Error: processing vignette ?BitSeq.Rnw' failed with diagnostics: Failed to locate the ?weave? output file (by engine ?utils::Sweave?) for

any useful books for learning the R statistical software? are they pricey? and if the books recommended focus on S, how compatible will they be for someone learning R? thank you in advance for your help. P.S. specialized survey statistical procedures? Is R good at that? [[alternative HTML version deleted]]

I was wondering what the criteria were for including books on the Books Related to R page <http://www.r-project.org/doc/bib/R-books.html>. (There is no maintainer listed on this page.) In particular, I was wondering why the following two books are not listed: * Andrew Gelman, Jennifer Hill, *Data Analysis Using Regression and Multilevel/Hierarchical Models*. (CRAN package 'arm') *