Displaying 20 results from an estimated 200 matches similar to: "xerbla called from BLAS routine (PR#8100)"
2019 Apr 24
2
R problems with lapack with gfortran
Hi,
I have tried to pinpoint potential problems which could lead to the
LAPACK issues that are currently seen in R. I built the current R
trunk using
AR=gcc-ar RANLIB=gcc-ranlib ./configure --prefix=$HOME --enable-lto
--enable-BLAS-shlib=no --without-recommended-packages
and used this to find problem areas.
There are quite a few warnings that were flagged, due to mismatches
in function
2001 Oct 01
1
Graceful exit from fortran.
Is there a way to exit gracefully from dynamically loaded Fortran,
(several layers down), if an error condition is detected?
I.e. suppose I'm within a subroutine called by a subroutine, ...,
called by .Fortran(); I want to give up gracefully if an error
condition is detected.
If I say something like
if(x .gt. 42.d0) stop
then indeed everything stops, i.e. R falls over. I'd
2006 Sep 27
1
Building R-2.3.1 for Windows with ATLAS
Ok, moved to R-devel.
I tried to build R-2.3.1. Since I intent to distribute this tuned R to
all other who have a computer like mine here at work I thought it was
best to stay with the latest stable release.
About your suggestion, I could'n find xerblas.o file. And I don't know
how to edit libf77blas.a. I tried to open it with VIM
(http://vim.sf.net/) but there was a lot of strange
2005 Aug 29
1
BLAS and ATLAS
On Mon, Aug 29, 2005 at 11:48:23AM +0100, Prof Brian Ripley wrote:
> On Mon, 29 Aug 2005, G?ran Brostr?m wrote:
> >LAPACK/BLAS routines call xerbla "if an input parameter has an
> >invalid value" (exact quote from XERBLA at Netlib). Other types of errors
> >are not printed (by xerbla), but it is up to the user to check the return
> >value of the argument
2006 Jan 13
1
Problems installing R 2.2.1
We are trying to install R2.2.1 on a IBM P655 Cluster, SuSE LE 9.1
We are using gcc v 3.3.3
and we are getting this error on make
g77 -fPIC -g -O2 -ffloat-store -c dlamc.f -o dlamc.lo
g77 -fPIC -g -O2 -c dlapack0.f -o dlapack0.lo
g77 -fPIC -g -O2 -c dlapack1.f -o dlapack1.lo
g77 -fPIC -g -O2 -c dlapack2.f -o dlapack2.lo
g77 -fPIC -g -O2 -c dlapack3.f -o dlapack3.lo
g77 -fPIC -g
2019 May 03
0
R problems with lapack with gfortran
Dear Thomas,
thank you for your input. I've debugged one of the packages and I
confirm that the breakage is related to passing of strings from C to
Fortran. Indeed, BLAS and LAPACK define a large number of subroutines
that take one or more explicit single-character strings as arguments.
Other than that, BLAS has only one function (xerbla), which takes a
string of unspecified length,
2004 Feb 26
2
ATLAS threaded 64 bit (Opteron) - need *.so?
Using ATLAS with R is an old topic quite covered in the "R
Administration" manual (and by R's "configure" script
collection).
I still do not easily manage to build R properly on our new AMD
Opteron (2-processor).
I did work with the current Atlas 3.6.0, configured manually
(but "express" version) to build a threaded ATLAS version, and
successfully ran Atlas'
2002 Dec 26
3
R-1.6.2beta_2002-12-20: build problems (PR#2395)
While builds and validations of R-1.6.2beta_2002-12-20 were
successful on several systems, there were a few failures:
------------------------------------------------------------------------
Apple Darwin 6.2 (MacOS 10.2.2) with gcc-3.2.1:
gcc -dynamiclib -flat_namespace -undefined suppress -o
.libs/libgslcblas.0.0.0.dylib sasum.lo saxpy.lo ... isamax.lo izamax.lo xerbla.lo -lc -install_name
2012 May 09
2
R Installation Manual - ATLAS BLAS guidance that is not in the current version
Good afternoon.
I am trying to compile a version of Rblas.dll based on ATLAS for the Corei7. I had remembered that there was mention of which file to adjust and that "xerbla" needed to be removed from one of the outputs from the last time I tried a few years ago. The most recent version of the R Installation manual does not say anything about this. An older version (2.10 I believe) has
2009 Jan 13
2
Using fortran code which call LAPACK subroutines
Hello
I'm trying to run a fortran code which use LAPACK subroutines. I think I
should use some points shown in the manual 5.5 Creating shared objects
but it is too technical for me :-(... Could anyone help me for the
procedure to do:
-which part of the manual is relevant for this type of question?
actually I'm speaking from writing R extensions, should I read R admin?
-point 1.2
2006 Sep 26
1
Building R for Windows with ATLAS
I think this is not a R-devel question. Sorry to all if I'm wrong,
please let me know.
I managed to build R successfully with the default BLAS but when I
change the MKRULES to use ATLAS BLAS and set the path to
"C:/cygwin/home/Administrador/ATLAS/lib/WinNT_ATHLONSSE2" I got the
following error message (I'm posting only the final part, there was a
lot of compilation before this):
2009 Mar 10
1
dger_ in BLAS definition
I'm developing some software and running into compiling warning:
conditionals.c:104: warning: passing argument 4 of 'dger_' discards
qualifiers from pointer target type
conditionals.c:104: warning: passing argument 6 of 'dger_' discards
qualifiers from pointer target type
the netlib documentation states that the arguments x and y should be
unchanged on exit. Should should
2010 Mar 31
2
Simplifying particular piece of code
Hello, everyone
I have a piece of code that looks like this:
mrets <- merge(mrets, BMM.SR=apply(mrets, 1, MyFunc, ret="BMM.AV120",
stdev="BMM.SD120"))
mrets <- merge(mrets, GM1.SR=apply(mrets, 1, MyFunc, ret="GM1.AV120",
stdev="GM1.SD120"))
mrets <- merge(mrets, IYC.SR=apply(mrets, 1, MyFunc, ret="IYC.AV120",
2009 Jun 26
1
problems compiling for RHEL 5.3 x86_64
Well, CentOS 5.3, which amounts to the same thing.
I recently decided to upgrade my main research machine from Fedora Core
8 -> CentOS 5.3. Basically, I was looking to move to a distro with
longer 'term-of-life' than the release schedule for Fedora currently
allows. The machine is a multi-Opteron box, so both 32- and 64-bit apps
natively supported. Since I do a lot of 'linear
2006 May 18
1
Stuck in R installation, help~~
Hi all,
I'm stuck in the installation of R.
When I run configure, I got the error:
configure: error: --with-readline=yes (default) and headers/libs are
not available
I followed one answer in some post and use this:
./configure --with-prefix=/home/user/R-2.2.1 --with-readline=no
It successfully configured but I encountered another problem while make:
gcc -shared -L/usr/local/lib64 -o
2010 Aug 18
11
When after_save isn't after the save....
I have a Production model, which represents a farmer''s crop. After
create (via after_save) I call a method that creates one or more
Supply models, which represent a week of anticipated product harvest.
After each of those are created, a class method gets called that tries
to match each new Supply with outstanding orders for the same time
period. If a match is made, a transaction (an
2003 Apr 17
3
R 1.7.0 installation problem: make check fails when using --with-lapack option
Greetings,
compiling R 1.7.0 with gcc 3.1.1 on Debain Linux (woody stable) with the
configure option --with-lapack works but make check fails in test base-R with
the message
[...]
> kappa(x1 <- cbind(1,1:10))# 15.71
[1] 15.70590
> kappa(x1, exact = TRUE) # 13.68
[1] 13.67903
> kappa(x2 <- cbind(x1,2:11))# high! [x2 is singular!]
[1] 8.351867e+16
>
> hilbert
2012 Apr 25
2
Test oddities
Can someone explain why a instance variable cannot be changed through an
association under rspec/factory_girl? An example is in this gist<https://gist.github.com/2484336>
.
All tests pass except the last. All the steps pass in the console.
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2009 Mar 11
1
libf95.a: could not read symbols?
I'm sorry for having to post this, but I've run out of ideas. I've been
trying to build R-2.8.1 from source for installation on FreeBSD 6.4
(seems to be working fine on osx) and keep getting the same results,
regardless of how I set ./configure
$ ./configure --enable-R-shlib --with-x=no --with-blas FFLAGS="-fpic"
R is now configured for x86_64-unknown-freebsd6.0
Source
2006 May 03
1
Installation problem
I am trying to install R-2.3.0 on a 64bit linux box and encounter
several error during the make step. I'd appreciate any help. Error
messages follow:
[root at calculon R-2.3.0]# make
make[4]: Entering directory
`/state/partition1/apps/packages/R-2.3.0/src/modules/lapack'
gcc -shared -L/usr/local/lib64 -o libRlapack.so dlamc.o dlapack0.o
dlapack1.o dlapack2.o dlapack3.o cmplx.o