similar to: trouble with netCDF (PR#824)

Greetings. I am attempting to add NetCDF libraries within R, and have failed. We have R version 2.8, and are running on a 64-bit Redhat Linux 2.6.18 kernel: Red Hat Enterprise Linux Client release 5.2 (Tikanga) Linux halfmoon.ncdc.noaa.gov 2.6.18-92.1.22.el5 #1 SMP Fri Dec 5 09:28:22 EST 2008 x86_64 x86_64 x86_64 GNU/Linux I have run the installation instructions found at

Does anyone know of a module for R to access NetCDF datasets? I remember reading about a module for Splus, but I can't seem to find anything on CRAN. -.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.- r-help mailing list -- Read http://www.ci.tuwien.ac.at/~hornik/R/R-FAQ.html Send "info", "help", or "[un]subscribe" (in the

Thomas, I'm using your package netCDF. Thanks for making it and for leave it available for public use. It took me a little while installing it, as my netcdf library is libnetcdf.a (not libnetcdf) and my library directory is not /usr/local/lib. Finally, I was able to install with the following: 1. ln -s libnet.a libnet (in my usr/local/netcdf-3.5.0/lib directory) 2. R CMD INSTALL

Friends, I tried to install ncdf package in ubuntu with the following command. R CMD INSTALL --configure-args="-with-netcdf_incdir=/apps/netcdf/4.0.1/gcc/include -with-netcdf_libdir=/apps/netcdf/4.0.1/gcc/lib" ncdf_1.6.tar.gz The installation was stopped throwing the following error. I tried to google it but didnt find any solution. someone kindly write me what is going wrong. **

Dear R users I am attempting to add lncdf_1.6.tar.gz libraries within R, and have failed. I have R version 2.8.1, and are running on fedora 10 Kernel Linux 2.6.293.-60.fc10.x86_64. I've run R CMD INSTALL ncdf_1.6.tar.gz and I have the following --------------- * Installing to library '/usr/lib64/R/library' * Installing *source* package 'ncdf' ... checking for gcc... gcc

Dear R communities Could you please help me with the problem I encounter while trying to install the ncdf package? download.packages("ncdf", "/home/user/soft/R/library/") cd /home/user/soft/R/library R CMD INSTALL ncdf_1.6.tar.gz # fail sudo R CMD INSTALL ncdf_1.6.tar.gz # fail cd /home/user/soft/ # download

The only database access package I see on CRAN is DBI. But is there a PostgreSQL driver for it yet? (where?) There is no sign of an RPgSQL package on CRAN either. What to do? Thanks, Bruce L. -.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.- r-help mailing list -- Read http://www.ci.tuwien.ac.at/~hornik/R/R-FAQ.html Send "info", "help", or

Dear All, I recently got a 64bit machine and had netcdf-3.6.2 installed. Then I tried to install ncdf package but got the following error message when using netcdflib: gcc -std=gnu99 -I/home/ljin/share/R-2.6.1/include -I/home/ljin/share/R-2.6.1/include -I. -I/usr/local/include -fpic -g -O2 -c ncdf2.c -o ncdf2.o gcc -std=gnu99 -I/home/ljin/share/R-2.6.1/include

Hi! I have been coding a C-program which will read data from the netCDF format (a commonly used file format in the geophysical research community: see Unidata's URL for explanation: http://www.unidata.ucar.edu/packages/netcdf/), and have got to the point where I don't know what the error message mean. The C-program is called nc2r.c. When compiling the code, I get a number of warnings,

I was trying to install software named ncview on a centos 5.3 box. ./configure command gave this error: Error, the X libraries and development headers must be installed for ncview to work! I was surprised that there were many google hits related to ubuntu, none for centos. So even though I eventually figured out what to do, I decided to share this with the list anyhow, so maybe next time I

Is there any way of preserving order of ordered factors when storing a table in PostgreSQL? I have been using PostgreSQL and the RPgSQL package to store a large table with answers such as "Strong disagreement", "Strong agreement", "Mild disagreement". "Mild agreement". When reading the table, such answers are turned into factors, apparently in

I've been developing a package and have been getting the following warning when running the check command: * checking S3 generic/method consistency ... WARNING plot: function(x, ...) plot.summaries: function(trees, sp) * checking for replacement functions with final arg not named 'value' ... OK * checking Rd files ... OK ...blah, blah, blah... * checking examples ... OK *

Hello, I have been having difficulties opening netcdf files using the netcdf library. I am able to successfully open the file and I can determine the names and size. However, when I try to read it I receive an error. Reading the documentation, I am wondering if this might be due to a difference between netcdf version 2 and more recent netcdf format? I've tried using different values for the

Hello, I'm trying to install ncdf4 on RHEL 5.8, R version 2.15.1. Previously installed is netcdf 3.6.2 from Red Hat, so I've compiled and installed netcdf 4.2.1.1 (with hdf5 and zlib as per install instructions, and also set --enable-netcdf4 option) into /usr/local. When attempting to install ncdf4 it is failing with: ** testing if installed package can be loaded Error in

Dear all, I would like to use data in .netcdf format and for those I have to use the netCDF or ncdf packages. Problem : these packages don't seem to work : "Error in testRversion(descfields) : This package has not been installed properly See the Note in ?library" (with netCDF package) Does anybody have the same problems with these packages ? Is there any

Buenas tardes, gracias a ambos por su ayuda, conseguí con éxito finalmente instalar ambos paquetes y abrir el netcdf de versión 4 desde RStudio. Mi consulta al siguiente paso, después de buscar sobre el tema es, como creo que no es posible realizar la transformación de netCDF-4 a netCDF-3, ¿es posible guardar con raster ese archivo .nc que pude abrir en R y ya llevarlo al SIG? Para ello he

Hello, I am a new user of R and Linux (debian squeeze), and I am trying to install the ncdf library. First I don't know wich is the best to use (ncdf or ncdf4), But not matter the one I tried to install, it always failled. I try to find a solution to this common problem on the web, but I never find the good way to solve it. I hope you could help me I try many things during two days and now I

Hi, I am using the package ncdf to create netCDF files and I want to mimic the the header of an exiting netCDF file created outside of R. Below is what the existing header looks like (part of it that is different): netcdf ccd1984_05_08 { dimensions: lat = 1974 ; lon = 1894 ; time = UNLIMITED ; // (1 currently) variables: int time(time) ;

I am looking for a package to read and write NetCDF files. NetCDF package says it can only read, not write. Another package for the standard binary file format? Daehyok Shin

Hello R-Group, I am new working with netcdf files and the raster package in R.I am trying to read in a netcdf file using the package "ncdf".I am able to get the lat, lon and parameter I need and can plot using fill.contour.Ultimately, I am trying to create a .asc file to reafd into GIS.I am using the package "raster" to read the parameter.When I read in with