similar to: mtrace function

Enio Jelihovschi" eniojelihovs@gmail.com Date: Fri, 20 Oct 2006 11:28:12 -0200 Subject: CORRESPONCE ANALYSIS Dear All I am new R user, trying to do correspondence analysis using the function mca of the package MASS. My question is: In the following example farms.mca <- mca(farms, abbrev = T) # Use levels as names plot(farms.mca, cex = rep(0.7, 2), axes = F) How can I change the

I need a help in the following code. I could not find any hint at the help files m <- c( 58, 47, 51, 57, 48) plot(1:5, m, pch=19, col=1:5, axes=FALSE) axis(1, at=1:length(m), labels=LETTERS[1:5], col.axis=2) The labels A B C D E appear in this case with the red color. What I really want is that thay get the same color as the circles, but if I try the line axis(1, at=1:length(m),

I WROTE THIS FUNCTION BELOW test <- function(x, ...) UseMethod('test', x) test.data.frame = function(x, model, which, error, ...) { av <- aov(formula(model), data = x) res <- test.aovlist(av, which = which, error = error) return(res) } test.aovlist <- function(x, which, error, ...) { mm <- model.tables(x, "means") tabs <- mm$tables[-1]

Hi all, I'm struggling a bit to get pgfSweave to lazyload objects when compiling a .Rnw file for a second time. Caching works fine except that for every run all objects get cached again and again. I've used cacheSweave which works fine; all cached objects from code-chunks with option cache = TRUE are lazy loaded. I've tried it on two machines ... I'm pretty sure I'm

Hi, everyone. I am using a fair amount of closures in my code. Problem i am experiencing is i cannot figure out how to mtrace functions defined within a function. There must be some way to name such function for mtrace to see it and let me step into it. For example, say i have code mymodel<-function(){ data<-numeric(0) build<-function(){ data<<-1 } m<-list()

Dear useRs, I am experiencing very strange error with Mark Bravington's package "debug". I haven't seen them before. Here is the sample session > library(debug) Loading required package: mvbutils MVBUTILS: no "tasks" vector found in ROOT Loading required package: tcltk Loading Tcl/Tk interface ... done > x<-function() return(1) > mtrace(x) > x() Error

Hi all, I am using "mtrace" malloc debugging utility to trace memory leaks in my application. I followed following steps: 1. Added mtrace() function in the beginning of my main function. 2. exported the MALLOC_TRACE environment variable. $ export MALLOC_TRACE=memory.log 3. Run the program 4. trace the program for memory leaks. $ mtrace <myprogram> $MALLOC_TRACE But In

Hello, pointed to the article "Debugging Without (Too Many) Tears" of Mark Bravington in Rnews Vol 3/3, December 2003 there is a package mvbutils mentioned. So I started to install this package from within R > install.package(mvbutils) I receive an error essage that this package is not found! Is due to a merge,removal or rename of this package? When I try to follow this

Hi all, Since three month ago I started working with R professionally, I never did it before, so I am such a newbie. I am having some problems using the 'debug' package. I love this package, but most of the times I wanna use it it just fails :P When typing at prompt 'mtrace(myfunct)' most of the times I get the following error: "Error in x[[i]] : subscript out of

Hello I need some help in figuring Bravington’s debugger out. Ok I have 2 functions, fun1 and fun2 saved in a ASCII file say filename is funs. Fun1 has a loop which calls fun2, fun2 has a loop which fails and I need to find out the value of the variables of the fun2 and fun1 loops at the specific iteration that fails. Both fun1 and fun2 loops will iterate thousands of times so line by line debug

I find the R debug package very useful. I've installed and used it on several of the machines I use, without problems, but on one machine I get the following error: Loading required package: mvbutils Loading required package: utils MVBUTILS: no "tasks" vector found in ROOT Loading required package: tcltk Loading Tcl/Tk interface ... done [Previously saved

We want to announce the Package ScottKnott now implemented at CRAN. The package uses the SkottKnott clustering algorithm to perform multiple comparison tests of means using the following experimental designs: Completely Randomized Design (CRD); Factorial Experiment (FE); Latin Squares Design (LSD); Randomized Complete Block Design (RCBD); Split-Plot Experiment (SPE); Split-Split-Plot Experiment

I am using getYahooData from TTR to get daily data. When i do it standalone, it is fine. It also works fine inside my code. However, when i run code inside mtrace(), i always get the following error: Error in xts(cbind(adj[[1]], adj[[2]]), index(obj)): order.by requires an appropriate time-based object After a lot of hand wringing, it looks to me that it happens because index in xts masks

Hello, In the past I have used intensively the mtrace function from the debug package, but now with my actual version of R(2.8.1) , it is impossible to use it anymore. I've updated all my packages, and I don't understand how solve this problem... Here is an example code : > foo<-function(){cat("Test Function")} > mtrace(foo) > foo() # A tcl/tk windows open

Hi Jannis [I'm the author of package debug... I know this is 6 months after your query, sorry-- but I don't subscribe to R-help, and you didn't post to the maintainer! I'm primarily sending this to close off the thread.] > when I use the package debug, mark a function with mtrace() and enter > into the browser like mechanism of debug a window displaying the code of >

Deal R , when I use the package debug, mark a function with mtrace() and enter into the browser like mechanism of debug a window displaying the code of the marked function with the current line highlighted usually appears. When I use GUIs other than ess or the standard R console sometimes this window is totally transparent so it is not possible to see any code in it. After closing/resizing

I would like to be able to trace execution into calls below the current function, or to follow execution as calls return. This is roughly the distinction between "step" and "next" in many debuggers. I would also like to be able to switch to a location further up the call stack than the location at which I enter the debugger, to see the context of the current operations. Are

How do you debug methods of a reference class? I've been using mtrace, which is excellent, but i cannot figure out how to mtrace a reference class method. Maybe there is some other way to debug these, for example with ordinary trace? for now i am only able to use options(error=recover), which is not giving me idea where exactly in the code i am once i am stopped on an error. -- View this

Dear R users, I tried to fit a cox proportional hazard model to get estimation of stratified survival probability. my R code is as follows: cph(Surv(time.sur, status.sur)~ strat(colon[,13])+colon[,18] +colon[,20]+colon[,9], surv=TRUE) Error in if (!length(fname) || !any(fname == zname)) { : missing value where TRUE/FALSE needed Here colon[,13] is the one that I want to stratify and the

On Tue, Nov 05, 2002 at 08:37:00AM -0800, Martin Pool wrote: > On 10 Oct 2002, "Green, Paul" <Paul.Green@stratus.com> wrote: > > No new CVS messages have appeared on the rsync-cvs archives since August > > 30th. This seems rather odd-- perhaps a daemon stopped working? If there > > has truly been no activity since that date, I apologize for > >