similar to: cluster analysis labels for dendrogram

Hi - I'm trying to append simple density histograms of a continuous variable to the leaves of an rpart tree. The splits in the tree are all levels of a factor and I'm hoping to make the histograms out of the subsets of the dataframe corresponding to the splits and for them to be attached to the appropriate leaf of the final tree. Any help would be much appreciated, thanks, Jon Zelner

Running dovecot 1.2.12 on ubuntu 10.10. Here is the problem: I have mysql backend for expire. I am using the dovecot-postfix package which creates /etc/dovecot/conf.d/01-mail-stack-delivery.conf which looks like this: # Some general options protocols = imap imaps managesieve disable_plaintext_auth = no ssl = yes ssl_cert_file = /etc/ssl/certs/ssl-mail.pem ssl_key_file =

Good afternoon, After cuting a hierarchical tree using cutree(), how to check correspondances between classes and branches? This is what we do: srndpchc <- hclust(dist(srndpc$x[1:1000,1:3]),method="ward") #creation of hierarchical tree plclust(srndpchc,hmin=20000) #visualisation srndpchc20000 = cutree(srndpchc,h=20000) #returns 4 classes table(srndpchc20000 ) srndclass20000 =

Thanks a lot, Michael! I cc to R-help, where this question really belongs {as the 'Subject' suggests itself...} -- please drop 'bioconductor' from CC'ing further replies. >>>>> "michael" == michael watson (IAH-C) <michael.watson at bbsrc.ac.uk> >>>>> on Thu, 17 Jun 2004 09:16:59 +0100 writes: michael> OK, admittedly it

im using plclust and want the labels to be different colors. i took a look at getS3method("plot","hclust") and saw a call to .Internal. i looked at the help on .Internal and dont know where to go next. any help appreciated! thanks, rafael

Hi List Is there a cron that I con do to replace this, as the fx0 card doesnt hang up properly phonegc:/home/samantha# asterisk -r Asterisk CVS-05/30/03-17:17:07, Copyright (C) 1999-2001 Linux Support Services, Inc. Written by Mark Spencer <markster@linux-support.net> ========================================================================= Connected to Asterisk CVS-05 currently running on

I am having trouble displaying a dendrogram of evolutionary relationships (a phylogram imported from the ape package) as the vertical component of a heatmap, but keeping the hierarchical clustering of the horizontal component. The relationships of the vertical component in the generated heatmap are not that of the dendrogram, although the ordering is. In more detail, I am attempting to generate

Hola a todos, No se si a alguien m?s le sucedi? lo mismo: Al mandar una pregunta a esta lista, que amablemente me respondieron Carlos y Javier, la primer respuesta que recib? fue de una persona que no tiene nada que ver con R ni nada por el estilo. Tiene pinta de ser spam. Posteriormente recib? otro correo de otra direcci?n de email con el mismo nombre y con el subject de mi pregunta.

Hey Guys We are replacing a BM4 with a trixbox (asterisk) virtual numbers as the customer wants to move the callcentre. They are asking for an equiv to the ipview I gather HUD may be or the panel view The problem is that we need to see (a) total calls in the queue (b) calls for specific DID - How can you give 1 DID preference to another DID ie DID 61740410001 = Fred Electrical DID

I use hierclust (hierarchical clustering) in multiv package. In the documentation it is said that plclust (plotting a dendrogram) is available in S-plus. Can I find it anywhere (I have searched through http://lib.stat.cmu.edu/S and found only quotations of plclust in multiv) or is it only part of the S package (which I don't have)? Thanks --------------- Charles RAUX, Laboratoire

Hi all, ok, i know i can cut a dendrogram, which i did. all i get is three objects that a dendrograms itself. for example: myd$upper, myd$lower[[1]], myd$lower[[2]] and so on. of course i can plot them seperately now. but the lower parts still have hundreds of branches. i?ll need a 30 " widescreen to watch the whole picture. what i?d like to is group the lower branches , so that i get a

I have an old A1 ISDN card that we used to use in the mid 1990's for the delivery of data to our ISP I have seen some users have been using them, with respect to doing web searches. Can someone please let me know what drivers I require to use this card under debian and with asterix, and what the limitations are of using this card. I dont want to make calls but do inbound using it. The

Hey Guys I have an indial range of 61211118[01234]X being trunked sip to xxx.yyy.189.65 Now I want to break this down into 612111180x going to xxx.yyy.188.145 and 612111184x going to xxx.yyy.189.199 reminder being used for fax->email etc etc etc I have created the outbound routes and sip trunks I can see that all the sip trunks are up I can see the outbound routes are there and

Hello,I'm still working with this data set, and trying to fit it with a nonlinear model. Here is my data > small <- c(507680,507670,508832,510184,511272,513380,515828,519160,525046,534046,547982,567124,590208,614506,637876,656846,669054,672976,668800,656070,637136,614342,590970,570752,554480,542882,535630,531276,528682,527682,527020,526834,526802,526860) test <- glm(dnorm(x),

Dear all, i performed a clusteranalysis - which worked so far... i plotted the dendrogram and sooo many branches, a rough sketch would be enough ;) i tried max.levels therefore which worked, but not for the plot... i used the following plot(hcd,nodePar =nP, str(hcd,max.level=1)) the output on the terminal was: --[dendrogram w/ 2 branches and 196 members at h = 2.70] |--[dendrogram w/ 2

Hi all, Can someone tell me how to justify (right or left) the labels on the branches of a dendrogram tree? I have produced a dendrogram via agnes and plotted it with pltree. The dendrogram terminal branch labels seem to be centre-justified by default and I was hoping to change this to left justification. Thanks, Duncan ***************************************** Dr. Duncan Mackay School of

Hi, I am a beginner for R. I had use gplots to generate a heatmap as following: >heatmap.2(matrix, col=topo.colors(75), dendrogram="column", Rowv=FALSE, trace="none", key=TRUE, keysize=0.8, density.info="none", cexRow=0.2, cexCol=0.6) It work well. It generate heatmap whith rcolumn clustering dendrogram and I can export a very nice graph. But I don not know how

Hi all, This is the first time I'm writing to R-devel, and this time I'm just asking for the purpose for a certain line of code in stats::as.hclust.dendrogram, which comes up as I'm trying to fix dendextend. The line in question is at line 128 of dendrogram.R in R-3.3.3, at stats::as.hclust.dendrogram: stopifnot(length(s) == 2L, all( vapply(s, is.integer, NA) )) Is there any

Dear R users, I have created data for hierarchical agglomerative cluster analysis which consist of the merging pairs and the agglomeration heights, e.g. something like my.merge <- matrix(c(-1,-2,-3,1), ncol=2, byrow=TRUE) my.height <- c(0.5, 1) I'd like to plot a corresponding dendrogram but I don't know how to convert my data to achieve this. Is it possible to create a

Is there any way to change the orientation of the labels on the end of the dendrograms to horizontal rather than vertical? If so, how can I do that. _____________________________________________ Patrick Richardson Biostatistician - Program of Translational Medicine Van Andel Research Institute - Webb Lab 333 Bostwick Avenue NE Grand Rapids, MI 49503 ph. 616.234.5787 This email message,