similar to: How to install dependent packages automatically

Hi, I need to link mypackage to 2 other packages so I can call some C functions defined in these 2 packages from mine. I've tried Depends: packageA, packageB LinkingTo: packageA, packageB as suggested by the "5.4 Registering native routines" section of the "Writing R Extensions" manual but then only packageA is seen at compilation time (gcc is called with

Hi all mailing listers, My question is as follows: e.g. I launched two packages, say packageA and packageB, but they have the function of the same name, leading to masking. I want to remove the packageA from the working window after using the packageA so as not to causing problem. I do not want to carry out task each time using packageA and packageB individually because many the tasks share

Hi, In the case where install.packages("packageA") also needs to install required package "packageB", then what is passed thru the 'configure.args' argument seems to be lost when it's the turn of packageA to be installed (the last package to get installed). This is not easy to reproduce but let's say you have the graphviz libraries installed on your system,

I have been using batch mode successfully. I try this using cygwin on a PC with 3.0.4 version of rsync. The two PackageOlder dirs are identical cygwin> diff -r /home/bill/tmp/PackageB /home/bill/PackageB cygwin> rsync -vv --only-write-batch=/Temp/changeAtoB.rsync -rptO -L --delete-delay devserver::RT/PackageB/ /home/bill/tmp/PackageA opening tcp connection to devserver port 873 sending

Hi guys, I recently faced an issue regarding SIP registration: I have a 2-NIC Linux PC, with eth0 set to address 192.168.1.1 (NATted over public network, with address 89.X.Y.Z) and eth1 set to address 1.1.1.1. In [sip.conf] I set general option bindaddr=0.0.0.0 ; IP address to bind to (0.0.0.0 binds to all) Then I have configured an account as following: [999] type=friend

Hi although the background is that it happened on an hpc cluster, this question does *not* concern hpc computing with R. I was using R on a cluster and had to install several packages in my home directory. Now the head node was migrated to new hardware (new install as well) and many dependencies for my in $HOME installed packages, which were present on the old head, are missing on the new head.

Hi all, I have a question regarding pending (zombie) SIP sessions: on Asterisk CLI, with command 'sip show channels' , I see two channels in use with callID and other infos detailed; also 'sip show inuse' give me same result (in terms of channels usage): Peer User/ANR Call ID Seq (Tx/Rx) Format Hold Last Message xx.xx.xx.79 209

Hi all, Some time ago I posted an issue regarding the hangup of active calls from the CLI and someone told me that "soft hangup" should work. Well, in fact it does work, but only if the channel is known, i.e. it doesn't work for zombie channels. For example, I have this scenario (CLI output of command "iax2 show channels") IP-AM-PBX*CLI> iax2 show channels Channel

Hi Duncan, Many thanks (yet again). With the hint given by your earlier email (viz that currently loadNamespace expects a 3rd component called name in the list that is used for the versionCheck argument) I had another look at what was going on with my toy examples yesterday evening. I'm still working on my issue, but thus far I have: 1) Confirmed that internal calls to loadNamespace

Hello, Thank you for your response. I need to install RankTail package since it contains the beta binomial distribution, CDF and inverse CDF in the usual form which I need to use. However rmutil package contain unusual forms for these functions. So it is easier for me to deal with the forms are contained in RankTail. I tried to install bioconductor package, using the following commands but I

Dear list, How can I detect a package is installed or not? If not, then install it. For example, in a script, I want to check the package DESeq is installed or not. If not, then I will using this script to install it. source("http://www.bioconductor.org/biocLite.R") biocLite("DESeq") The pseudo script would be like this: try: library("DESeq") catch:

Neither biocLite nor the GUI menus can install packages on my system. Here is relevant output: > version _ platform i386-pc-mingw32 arch i386 os mingw32 system i386, mingw32 status major 2 minor 11.1 year 2010 month 05 day 31 svn rev 52157 language R version.string R version 2.11.1 (2010-05-31) > source("http://bioconductor.org/biocLite.R") BioC_mirror =

Dear All, I am trying to build a package for a set of functions. I am able to build the package and its working fine. When I check it with R CMD check I get a following warning : no visible global function definition for ‘biocLite’ I have used biocLite to load a user defined library from within a function if that library is not pre-installed

The warnings from make.packages.html() on the Apple Mac OS X platform can be dealt with as follows: ------------------------------------------------ (1) make.packages.html() uses the function tempdir() and attempts to create a temporary directory in the default location /tmp/ which fails due to the /tmp directory architecture on the Mac. I set up a .Renviron file in my user account

To whom it may concern. As I would like to analyse some array data I was keen on downloading the lumi package that depends obviously on hdrcde that is not available for r 2.12.1. I did not find instructions to solve or circumvent this problem. Installing hdrcde by hand did not work either. It was not detected by > (.packages(all.available=TRUE)) if installed in the R library. Thanks Hermann

Hi, I am unable to install packages on my R 2.12.0 Windows 7 machine. Here are the relevant lines: sessionInfo() R version 2.12.0 (2010-10-15) Platform: x86_64-pc-mingw32/x64 (64-bit) locale: [1] LC_COLLATE=English_United States.1252 LC_CTYPE=English_United States.1252 LC_MONETARY=English_United States.1252 [4] LC_NUMERIC=C LC_TIME=English_United States.1252

Why am I seeing the following in R-devel (sept 2, 2006 build) on opensuse 10.1? I'm sure it is something simple I am missing, but I just don't see it (output below). Thanks, Sean > readLines(url("http://www.bioconductor.org/biocLite.R")) [1] "source(\"http://bioconductor.org/getBioC.R\")" [2] ""

Hi Nguyen, > Subject: [R] install "multtest" and "preprocessCore" packages in > Bioconductor library > Date: Wed, 30 Nov 2011 09:57:36 -0800 > From: UyenThao Nguyen <unguyen at tethysbio.com> > To: r-help <r-help at r-project.org> > CC: uth.nguyen at ucdavis.edu <uth.nguyen at ucdavis.edu> > > Hi All, > > I've tried to

--- On Tue, 15/7/08, haani hanni <maaryam_khan@yahoo.com> wrote: From: haani hanni <maaryam_khan@yahoo.com> Subject: how i can install Rgraphviz in R2.7.1 To: "Nabble" <support@nabble.com> Cc: r-help-request@r-project.org Date: Tuesday, 15 July, 2008, 1:39 PM hello i am a new user of R.i have window XP Proffessional in my P.C.i wanted to make the graphs of my

I?m following along a few tutorials on the web and trying to implement my own example, but I must be missing something because I can?t get has_many or belongs_to to work like I expected. now I have watched all the videos and made a cookbook several times with different interfaces. what I''m looking for is *not* a code snippet to solve something (because I already have that),