Displaying 20 results from an estimated 300 matches similar to: "Conditional Logistic Regression in R"
2011 May 18
1
How to make array of regression objects
Dear all,
I have made couple logistic regressions, what making a distribution of some
event.
Currently, i store it like this:
o1 <- lrm(...)
o2 <- lrm(...)
o3 <- lrm(...)
...
Then, i have made a function to peak required regression object from this
variables by it number:
get_object <- function(obj_name, nModel) {
eval (parse(text=paste("o <- ", obj_name, nModel,
2010 Apr 27
2
How to work out 3-way probabilities
Hello.
I have a quick question.
I try to use logit regression, to work out probabilities in the sport event.
I have work out probabilities for group of 2 players:
p1 - probability, what player1 will beat player2
p2 - probability, what player2 will beat player1
pt - tie probability, p1 <- 1 - p1 - p2;
Now i want to work out probabilities for group of 3 players, like:
pg1 - probability, what
2016 Apr 26
0
survival::clogit, how to extract residuals for GOF assessment
Hi Folks,
Hopefully this question has enough R and not too much stats to be
appropriate for this list. Based on,* Hosmer et al. 2013. Logistic
regression for matched case-control studies. Applied Logistic
Regression *(eqtn.
7.8)*, *I am assessing GOF of conditional (or matched) logistic regression
models with the *standardized Pearson residuals*. The authors define
?large? as delta chi-squared
2011 Mar 04
2
How to copy data from data.frame to matrix
Hello
I'm a new in R
I have a large data.frame "s" (this is actualy just a table in mysql) :
> names(s)
[1] "symbols", "day", "value"
I need to convert it to simple matrix. I have define this matrix like this:
> data.matrix <- matrix(nrow=nDays, ncol=nSymbols, dimnames=list(days,
symbols))
then i just copy values to the matrix using for()
2006 Jun 06
0
Get value from form using rjs, and problem with Safari
Hi,
I have got two forms, the first is a textarea plus a link that activates
some javascript to change the form, the second activates some javascript on
the onchange event which changes it into a textarea form.
This works in Firefox, but not in Safari.
Also, I need the value which is selected. I''ve found an example that gives
the parameter to the javascript, like this:
<input
2008 Nov 07
0
clogit and small sample sizes: what to do?
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1
Conditional logistic regression and small sample sizes: what to do?
Dear R-Gurus,
[I run R 2.8.0 on WinXP. I have no formal training in statistics.]
Please feel free to skip the 'Blah blah part' for questions below.
- ---Blah blah part--------
Why I use clogit (package 'survival')?: I am looking for risk factors
for cases during a
2006 Jul 29
0
Help with clogit in survival - conditional logistic regression
Dear All:
I have been struggling to run the conditional logistic regression on a
dataset. I am using clogit function in survival package. Here is how the
data is generated. I tried to shorted the data by using the second count
variable but still the clogit did not run. Why I am not able to run clogit
on my dataset. I appreciate any input.
Regards,
Ashraf
age <- c(rep(0,8),rep(1,8))
scc <-
2006 Jun 06
1
Getting value of form using Ajax (and problems with Safari)
I have got two forms, the first is a textarea plus a link that activates
some javascript to change the form, the second activates some javascript
on the onchange event which changes it into a textarea form.
This works in Firefox, but not in Safari.
Also, I need the value which is selected. I''ve found an example that
gives the parameter to the javascript, like this:
<input
2006 Mar 07
10
Star Rating Component?
Hi,
I''m looking for a star rating component for RoR, a bit like Votio
(http://redalt.com/downloads/ - find the votio heading) or the star
rating used on Amazon.
I don''t really need the AJAX capabilities, just the ability to bind the
results to a hidden drop down, or radio inputs.
Multiple raters per page is also an issue.
Any recomendations?
--
Posted via
2003 Jan 22
1
something wrong when using pspline in clogit?
Dear R users:
I am not entirely convinced that clogit gives me the correct result when I
use pspline() and maybe you could help correct me here.
When I add a constant to my covariate I expect only the intercept to change,
but not the coefficients. This is true (in clogit) when I assume a linear in
the logit model, but the same does not happen when I use pspline().
If I did something similar
2011 Nov 07
2
help with formula for clogit
I would like to know if clogit function can be used as below
clogit(group~., data=dataframe)
When I try to use in above format it takes a long time, I would appreciate
some pointers to get multiple combinations tested.
set.seed(100)
d=data.frame(x=rnorm(20)+5,
x1=rnorm(20)+5,
x2=rnorm(20)+5,
x3=rnorm(20)+5,
x4=rnorm(20)+5,
x5=rnorm(20)+5,
x6=rnorm(20)+5,
x7=rnorm(20)+5,
x8=rnorm(20)+5,
2017 Nov 13
1
Bootstrap analysis from a conditional logistic regression
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Hello
How can I perform
2006 Dec 12
1
Calculating AICc using conditional logistic regression
I have a case-control study that I'm analysing using the conditional
logistic regression function clogit from the survival package.
I would like to calculate the AICc of the models I fit using clogit.
I have a variety of scripts that can calculate AICc for models with a
logLik method, but clogit does not appear to use this method.
Is there a way I can calculate AICc from clogit in R?
Many
2011 Dec 12
1
k-folds cross validation with conditional logistic
--begin inclusion --
I have a matched-case control dataset that I'm using conditional
logistic regression (clogit in survival) to analyze. I'm trying to
conduct k-folds cross validation on my top models but all of the
packages I can find (CVbinary in DAAG, KVX) won't work with clogit
models. Is there any easy way to do this in R?
-end inclusion --
The clogit funciton is simply a
2004 Jun 06
0
strata() in clogit()
How can I get the log odds associated with the levels in strata()
within a clogit() model? I'm running R-1.9.0 on a Linux platform.
I am using clogit() to run a Rasch model in Item Response Theory in
psychometrics. Symbolically, the model is:
logit(p_{j,k}) = \log({\Pr(p_{j,k}) \over \Pr(1-p_{j,k})}) =
\theta_j - \alpha_k,
That is, the log odds of answering an test item correctly is
2002 Dec 10
3
clogit and general conditional logistic regression
Can someone clarify what I cannot make out from the
documentation?
The function 'clogit' in the 'survival' package is
described as performing a "conditional logistic regression".
Its return value is stated to be "an object of class clogit
which is a wrapper for a coxph object."
This suggests that its usefulness is confined to the sort of
data which arise in
2006 Mar 23
2
clogit question
Hi,
I am playing with
clogit(case~spontaneous+induced+strata(stratum),data=infert)
from clogit help file.
This line works.
1. But, why strata(stratum) doesn't have a coefficient like spontaneous
and induced?
2. When I remove strata(stratum) from the command, this function seems
to keep running forever. Why?
3. I think the equation for clogit looks like
P=1/(1+
2008 Mar 07
0
How to do a time-stratified case-crossover analysis for air pollution data?
Dear Experts,
I am trying to do a time-stratified case-crossover analysis on air
pollution data and number of myocardial infarctions. In order to avoid
model selection bias, I started with a simple simulation.
I'm still not sure if my simulation is right. But the results I get from
the "ts-case-crossover" are much more variable than those from a glm.
Is this:
a. Due to
2008 Mar 07
0
How to do a time-stratified case-crossover analysis for air pollution data? Unformatted text-version, with an additional note
Dear Experts,
I am trying to do a time-stratified case-crossover analysis on air pollution data and number of myocardial infarctions. In order to avoid model selection bias, I started with a simple simulation.
I'm still not sure if my simulation is right. But the results I get from the "ts-case-crossover" are much more variable than those from a glm.
Is this:
a. Due to the simple
2003 Aug 15
2
Error in model.frame
I am getting an error that I don't understand, and wonder if anyone
could explain what's going on. I call a function defined thus:
clogit.rds<-function(formula,data,extra.data,response.prob,
na.action=getOption("na.action"),subset=NULL,
control=coxph.control()){
method="exact" # only option for now
mf<-match.call()