similar to: factanal error

Hi. I have a csv file. I imported it with mydata<-read.table("C:/dataForR/radiology/WordFrequency.csv", header=TRUE, sep=",") > dim(mydata) [1] 982 925 The first column had the doc numbers like doc1, doc2, etc. so I did mydataNum<-mydata[,-1] > dim(mydataNum) [1] 982 924 The second to last column was also not numeric and so I did >

Hi. I started with a file which was a sparse 982x923 matrix and where the last column was a variable to be predicted. I did principle component analysis on it and arrived at a new 982x923 matrix. Then I ran the code below to get a neural network using nnet and then wanted to get a confusion matrix or at least know how accurate the neural net was. I used the first 22 principle components only for

Hi Can anybody please suggest me about the documentation of "factanal.fit.mle()" (Not factanal()------ searching factanal.fit.mle() in R always leads to factanal()). Is there any function for doing principal component factor analysis in R. Regards Souvik Bandyopadhyay JRF, Dept Of Statistics Calcutta University [[alternative HTML version deleted]]

Hi. It seems that nearly every time I try to use factanal I get the following response: >faa2db1<-factanal(mretdb1,factors=2,method="mle",control=list(nstart=25)) Error in factanal(mretdb1, factors = 2, method = "mle", control = list(nstart = 25)) : unable to optimize from these starting value(s) > In the case cited above, mretdb1 is synthetic data created

Hi list, I'm performing a series of confirmatory factor analysis on different groupings of items from data collected with questionnaires. There are some missing values. For those sets with no missing values I call factanal(datamatrix,factors=n) where datamatrix is a table of all observations for the items under investigation. This call fails when there are missing values. help(factanal)

Dear R users: I'm wondering if it's possible to get the residual correlation matrix when using factanal. Since factanal assumes that the errors are normally distributed and independent (provided the factor model fits the data) this would be useful. Of course you would need to submit the data to the function to get the residuals (not just their correlation matrix), but it should be possible

Hello! I have a question about the factanal function. This function returns at the end test statistics like this: Test of the hypothesis that 4 factors are sufficient. The chi square statistic is 4.63 on 2 degrees of freedom. The p-value is 0.0988 Is it possible to get the chi square statistic and the p-value as variables, not the text on the screen? An object of class "factanal"

Dear friends, I'm using R to produce the following Factor Analysis: > matriz.cor<-hetcor(matrix(as.factor(data), ncol=variables, byrow=T))$correlations > factanal(x=data, factors=2, covmat=matriz.cor, scores='regression') Then the screen output shows the following message: Error en factanal(x = data, factors = 2, covmat = matrix, : requested scores without

Hi, I am currently trying to execute the following command: f<-factanal(factors=k$Components$nparallel,covmat=m,n.obs=2287,rotation="varimax",control=list(opt=list(method=c("BFGS")))) but keep getting the error: L-BFGS-B needs finite values of 'fn' I can't figure out what I am doing wrong here, why isn't optim being told to use BFGS instead of L-BFGS-B...

Dear R developers, Would it be possible to make `factanal` to also accept functions and not just function names for its `rotation` parameter? If I understand correctly, `do.call` also supports this. Best greetings, Stefan -------------- next part -------------- A non-text attachment was scrubbed... Name: patch.diff Type: text/x-patch Size: 568 bytes Desc: patch.diff URL:

Dear list members, Could any expert on factor analysis be so kind to explain how to calculate AIC on the output of factanal. Do I calculate AIC wrong or is factanal$criteria["objective"] not a negative log-likelihood? Best regards Jens Oehlschl?gel The AIC calculated using summary.factanal below don't appear correct to me: n items factors total.df rest.df model.df

Dear list members, Could any expert on factor analysis be so kind to explain how to calculate AIC on the output of factanal. Do I calculate AIC wrong or is factanal$criteria["objective"] not a negative log-likelihood? Best regards Jens Oehlschl?gel The AIC calculated using summary.factanal below don't appear correct to me: n items factors total.df rest.df model.df

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Hi, I have a set of covariance matrices but not the original data. I want to carry out some exploratory factor analysis. So, I am trying to construct a covariance matrix list as the input for factanal. I can construct a list which includes the cov, the centers, and the n.obs. But it doesn't work. I get an error that says "Error in sqrt(diag(cv)) : Non-numeric argument to mathematical

In R factanal output, I can't find a function to give me residuals e. I mannually got it by using x -lamda1*f1 -lamda2*f2 - ... -lamdan*fn, but the e I got are not uncorrelated with all the f's. What did I do wrong? Please help. Yijun ____________________________________________________________________________________ Be a better friend, newshound, and

Dear list members, I apologize for putting this (probably) very basic question on the mailing list. I have scanned through the R website (using search) but did not found an answer. (code included below) A factor matrix is simply extracted (which can then subsequently be exported using write.table) by FACT$loadings[1:6,]. I would also like to specifically extract and export

Hi everyone, I'm running a factor analysis on a correlation matrix with 32 rows and columns. I get the following error when I issue the command sequence mich.fac1 <- factanal(michcor, factor=1) Error in solve.default(cv) : system is computationally singular: reciprocal condition number = 3.24729e-18 I'd really appreciate an explanation for this error and a solution to the problem

Hi! I am trying to analyse with R a database that I have previously analysed with SPSS. Steps with SPSS: Factorial analysis Extraction options : I select = Principal component analysis Rotation: varimax Steps with R: I have tried it with varimax function with factanal or with princomp...and the results are different of what I have with SPSS. I think that varimax function is incorporated in

Dear all, i wonder if there?s a command to obtain the actual values of a principal component or a factor (not as.factor, but factanal) . test=princomp(USArrests, cor = TRUE) summary(test) just outputs, standard deviation, Prop of Variance and cumulative proportion of variance. test$loadings offers yet another proportion of variance scheme. why is that? Apart from that: Is there a

Dear R-help, Using R 1.2.1 on Windows98 to run a factor analysis on a 64x150 matrix of data generated from a simulation model, factanal() reported that it failed to find a solution. Looking at the factanal code, I see the immediate condition that triggered the result: if (best == Inf) stop("Unable to optimize from these starting value(s)") So I am sure factanal() is giving