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...day 22 svn rev 45424 language R version.string R version 2.7.0 (2008-04-22) vQ -- ------------------------------------------------------------------------------- Wacek Kusnierczyk, MD PhD Email: waku at idi.ntnu.no Phone: +47 73591875, +47 72574609 Department of Computer and Information Science (IDI) Faculty of Information Technology, Mathematics and Electrical Engineering (IME) Norwegian University of Science and Technology (NTNU) Sem Saelands vei 7, 7491 Trondheim, Norway Room itv303 Bioinf...

...he code. The patch was made based on the src/main/character.c file in R-devel_2009-01-20. Patched code was successfully compiled and tested on 32bit Ubuntu 8.04. Regards, Wacek -- ------------------------------------------------------------------------------- Wacek Kusnierczyk, MD PhD Email: waku at idi.ntnu.no Phone: +47 73591875, +47 72574609 Department of Computer and Information Science (IDI) Faculty of Information Technology, Mathematics and Electrical Engineering (IME) Norwegian University of Science and Technology (NTNU) Sem Saelands vei 7, 7491 Trondheim, Norway Room itv303 Bioinf...

The explanation is that quote() is a primitive function and that the argument matching rules do not apply to primitives. That section of the R Language definition should say that primitives are excluded; it is documented in ?.Primitive. -thomas On Thu, 2 Apr 2009 waku at idi.ntnu.no wrote: > Full_Name: Wacek Kusnierczyk > Version: 2.10.0 r48269 > OS: Ubuntu 8.04 Linux 32 bit > Submission from: (NULL) (129.241.199.164) > > > In the following example (and many other cases): > > quote(a=1) > # 1 > > the argument matching is...

Full_Name: Wacek Kusnierczyk Version: 2.8.0 and 2.10.0 r48242 OS: Ubuntu 8.04 Linux 32 bit Submission from: (NULL) (80.202.30.36) The following raises an error: if (as.raw(1)) 1 # error: unimplemented type 'raw' in 'asLogical' However, ?'if' says: " Arguments: cond: A length-one logical vector that is not 'NA'. Conditions of length

...language R version.string R version 2.9.0 Under development (unstable) (2009-02-12 r47904) vQ -- ------------------------------------------------------------------------------- Wacek Kusnierczyk, MD PhD Email: waku at idi.ntnu.no Phone: +47 73591875, +47 72574609 Department of Computer and Information Science (IDI) Faculty of Information Technology, Mathematics and Electrical Engineering (IME) Norwegian University of Science and Technology (NTNU) Sem Saelands vei 7, 7491 Trondheim, Norway Room itv303 Bioinf...

...but not at the end of the output; no other language i know would do that this way) and actually wrong wrt. the algorithm. Any opinion? What was the ground for this design? vQ -- ------------------------------------------------------------------------------- Wacek Kusnierczyk, MD PhD Email: waku at idi.ntnu.no Phone: +47 73591875, +47 72574609 Department of Computer and Information Science (IDI) Faculty of Information Technology, Mathematics and Electrical Engineering (IME) Norwegian University of Science and Technology (NTNU) Sem Saelands vei 7, 7491 Trondheim, Norway Room itv303 Bioinf...

Full_Name: Wacek Kusnierczyk Version: 2.8.0 and 2.10.0 r48242 OS: Ubuntu 8.04 Linux 32 bit Submission from: (NULL) (129.241.110.161) In the following code: duplicated(data.frame(), incomparables=NA) # Error in if (!is.logical(incomparables) || incomparables) .NotYetUsed("incomparables != FALSE") : # missing value where TRUE/FALSE needed the raised error is clearly not the

Full_Name: Wacek Kusnierczyk Version: 2.10.0 r48269 OS: Ubuntu 8.04 Linux 32 bit Submission from: (NULL) (129.241.199.164) In the following example (and many other cases): quote(a=1) # 1 the argument matching is apparently incorrect wrt. the documentation (The R Language Definition, v 2.8.1, sec. 4.3.2, p. 23), which specifies the following algorithm for argument matching: 1. Attempt to

Tested in R 2.8.1 Windows > ff <- formals(function(x)1) > ff1 <- as.list(function(x)1)[1] # ff1 acts the same as ff in the examples below, but is a list rather than a pairlist > dput( ff , control=c("warnIncomplete")) list(x = ) This string is not parsable, but dput does not give a warning as specified. > dput( ff ,

Dear experts, For the makeGenotype function I need a list as in the example. However, since my list needs to be 184 long there must be an easy way to make it. >list(1:2,3:4,5:6,7:8) [[1]] [1] 1 2 [[2]] [1] 3 4 [[3]] [1] 5 6 [[4]] [1] 7 8 I have tried lis<-1:184 dim(lis)=c(92,2,1) as.list(lis) and several other options. Any suggestions? many thanks Marco [[alternative

Hello! I have the problem that in my function the passed variable is not used, but the variable name of the dataframe itself?- difficult to explain, but an easy example: TestFunc<-function(df, group) { ??? print(names(subset(df, select=group))) } df1<-data.frame(group="G1", visit="V1", value=0.9) TestFunc(df1, c("group", "visit")) Result: [1]

...lman/listinfo/r-help > PLEASE do read the posting guide > http://www.R-project.org/posting-guide.html > and provide commented, minimal, self-contained, reproducible code. -- ------------------------------------------------------------------------------- Wacek Kusnierczyk, MD PhD Email: waku@idi.ntnu.no Phone: +47 73591875, +47 72574609 Department of Computer and Information Science (IDI) Faculty of Information Technology, Mathematics and Electrical Engineering (IME) Norwegian University of Science and Technology (NTNU) Sem Saelands vei 7, 7491 Trondheim, Norway Room itv303 Bioinform...

Full_Name: Wacek Kusnierczyk Version: 2.10.0 r48365 OS: Ubuntu 8.04 Linux 32bit Submission from: (NULL) (129.241.110.141) sprintf has a documented limit on strings included in the output using the format '%s'. It appears that there is a limit on the length of strings included with, e.g., the format '%d' beyond which surprising things happen (output modified for conciseness):

Full_Name: Wacek Kusnierczyk Version: 2.10.0 r48181 OS: Ubuntu 8.04 Linux 32bit Submission from: (NULL) (129.241.199.135) there seems to be something wrong with r's regexing. consider the following example: gregexpr('a*|b', 'ab') # positions: 1 2 # lengths: 1 1 gsub('a*|b', '.', 'ab') # .. where the pattern matches any number of

Full_Name: Wacek Kusnierczyk Version: 2.8.0 and 2.10.0 r48231 OS: Ubuntu 8.04 Linux 32 bit Submission from: (NULL) (80.202.30.36) According to the R Language definition (sec. 3.4.3), [.data.frame has the following properties: "if two indices are supplied (even if one is empty) it creates matrix-like indexing for a structure that is basically a list of vectors of the same length. If a

Full_Name: Wacek Kusnierczyk Version: 2.8.0 and 2.10.0 r48231 OS: Ubuntu 8.04 Linux 32 bit Submission from: (NULL) (129.241.198.65) In a previous report (Incorrect behaviour of [.data.frame (PR#13628), awaiting approval) I showed that [.data.frame behaves incorrectly (i.e., in contradiction to what ?'[.data.frame' and the R Language Definition say): d = data.frame(a=1:3, b=4:6)

some time ago i communicated the same issue to sean, and i'm very glad he has improved the package -- thanks! i'm purposefully posting to r-devel rather than to bioconductor. i think that download.file could be improved to avoid this sort of spamming output seen previously with getGEO. currently, it prints dots (when it does) in 5 10-packs per line, line after line. instead, it could

Full_Name: Wacek Kusnierczyk Version: 2.8.0 and 2.10.0 r48163 OS: Ubuntu 8.04 Linux 32bit Submission from: (NULL) (129.241.198.172) the following code illustrates a problem with sprintf which consistently causes a segfault when applied to certain type of arguments. it also shows inconsistent consequences of the segfault: (e = tryCatch(stop(), error=identity)) # e is an error object