search for: venne

Displaying 20 results from an estimated 270 matches for "venne".

Did you mean: venn
2013 Jan 27
3
Package: VennDiagram. Error in draw.pairwise.venn Impossible: cross section area too large
Dear list, When I use VennDiagram package, I got a error as follow: venn.plot <- draw.pairwise.venn( area1 = 3186, area2 = 325, cross.area = 5880); Error in draw.pairwise.venn(area1 = 3186, area2 = 325, cross.area = 588) : Impossible: cross section area too large. Does anyone have suggestion? Thank you.
2011 Jul 13
1
venn diagram in percentage
Hi, I am a beginner with "R" and found a package "venn" to create a venn diagram. I tried this “venn” function to generate venn diagram, but i need *Percentage values* instead of counts(frequency) in the oval(circles) of Venn diagram. Output : http://r.789695.n4.nabble.com/file/n3664380/output.docx output.docx I have written have the code as below : # venn diagram for more
2006 Sep 26
2
venn diagram with more than three vectors
Hi, I am using venn diagram function in AMDA to plot the venn diagram. But it seems in this function, it can only plot 3 or less vectors. Is there a way to plot the venn diagram with more than 3 vectors? Please help. Thanks. Z --------------------------------- [[alternative HTML version deleted]]
2007 May 31
3
Venn diagram
Hello, I am a total beginner with ?R? and found a package ?venn? to create a venn diagram. The problem is, I cannot create the vectors required for the diagram. The manual say: "R> venn(accession, libname, main = "All samples") where accession was a vector containing the codes identifying the RNA sequences, and libname was a vector containing the codes identifying the
2011 Jul 13
0
venn diagram color using "venn"
Hi, I found a package "venn" to create a venn diagram. I need to color the circles. Can any one suggest me how to do using "Venn". -- View this message in context: http://r.789695.n4.nabble.com/venn-diagram-color-using-venn-tp3664528p3664528.html Sent from the R help mailing list archive at Nabble.com.
2011 Dec 02
0
Save Venn-diagram (Vennerable) together with table and plot in single pdf page
Dear R-users I want to save a list with characters a point plot and a Venn diagram in a single pdf page. I am successful to do this when I use a character list and two point plots. However when I try to replace the first point plots with my Venn diagram (built with Vennerable package, compute.Venn() and plot.Venn()) the Venn plot will not position at the right place in the pdf. I guess there are some parameters in the plot.Venn function, that I need to change but I did not find out which ones. Here an example of the pdf with two point plots as I want it: libra...
2011 May 07
1
venn diagramm
Dear all, I have a set of five datasets with string, for which I need to draw the venn diagram. there are tools available to draw venn diagram online, but limited to three sets. I can also generate venn for three from limma package, but do not know how to proceed with five subsets. Help me in drawing the same any script . Thank you Khush [[alternative HTML version deleted]]
2009 Aug 03
2
combine venn diagram and pie chart
Hi R users, I am wondering if it there is any R's function helping integrate venn diagram and pie chart to compare two related datasets. I know the package limma(bioconductor) has something built-in for making venn diagram, but I guess it would be very painful to use line and text to specify the proportions in the fashion of pie chart . Thanks in advance, Kevin Chang -- View this
2010 May 19
1
colored venn diagram
Hi list, This is probably too much to ask, but I'm wondering if there is a ready-to-use function somewhere that allows me to color one area of a venn diagram (e.g. the intersection of two sets)? Thanks! ...Tao
2011 Nov 11
1
proportional area venn diagrams?
In http://finzi.psych.upenn.edu/R/Rhelp02a/archive/14637.html some rudimentary R functions were given for drawing proportional area venn diagrams with area of each intersection ~ the count in a 2 x 2 x 2 table. I'm interested in this, for another application: showing the correlations among Y, X1, X2 using area ~ r^2 of each pair (sometimes called a Ballantine diagram). Before I attempt
2005 Jun 09
5
How to plot more than 3 sets in Venn Diagrams?
I'm trying to plot Venn diagrams with more than 3 sets (5 actually) in order to describe graphically the genetic variation between populations. I tried the limma library but realised it can only plot 3 sets. Is there any solution? Of course I could plot the chart manually but it'll take too long (have other datasets)..... One of my dataset is given below. THanks for any advice. j
2006 Sep 02
0
venn diagrams
I need to generate venn diagrams for some of my data. I am using the venn library. Is there a function that generates the ids and attributes that I can pass on to venn Library(venn) ids <- c(1,1,1,2,2,2,3,3,3,4,4,5,5,5,6,6,7,8,9,10) attributes <-
2012 Dec 03
0
Creating Venn-like intersections for multiple data sets: Vennerable Package help
I was wondering if you could lend me some advice in using the Vennerable package. I am having trouble creating the right sort of Venn function output. I have "TRUE" and "FALSE"/NA str(mutset) 'data.frame': 2310 obs. of 3 variables: $ TestResult.1 : chr NA NA NA NA ... $ TestResult.2 :ch...
2016 Apr 08
4
(no) circular dependency
Hi Mark, Uhm... sometimes this is not always possible. For example I have a package QCA which produces truth tables (all combinations of presence / absence of causal conditions), and it uses the venn package to draw a Venn diagram. It is debatable if one should assimilate the "venn" package into the QCA package (other people might want Venn diagrams but not necessarily the other QCA
2012 Feb 28
2
from data.frame to Venn diagram
Hello All, I have a data.frame with this structure: m <- matrix(sample(c(rep('yes', 10, replace = TRUE), rep('no', 10, replace = TRUE), NA), 500, replace = TRUE), nrow = 100, ncol = 5) colnames(m) <- colnames(m, do.NULL = FALSE, prefix = "col") m <- as.data.frame(m) I need to generate a Venn diagram from this data.frame, displaying the various intersections of
2011 Mar 09
3
Venn Diagram corresponding to size in R
I was wondering if anyone could help me figure out how to make a Venn diagram in R where the circles are scaled to the size of each dataset. I have looked at the information for venn (in gplots) and vennDiagram (in limma) and I cannot seem to figure out what parameter to change. I have looked this up online and do not seem to be seeing anyone else who has posted this question or the answer to it
2010 Dec 07
1
colorful venn diagram
Hi all, I am trying to plot a venn diagram using vennDiagram in limma package, but I have no idea how to have it colorful such as the color one created by the following website: http://www.pangloss.com/seidel/Protocols/venn.cgi. Any one has any advice? Thanks, D.
2010 Feb 23
1
How to change a venn command into a named object that can be plotted like a lattice object
Hello, I am plotting data as a venn diagram but would like to be able to control how it is plotted like a lattice object. Right now, it plots right away. I would like to name it and then plot at will. I thought to convert the whole thing to a PostScript file then get it back into R via grImport, but surely (please!) there must be a less roundabout way to do this. Any help is appreciated. Here
2010 Jan 31
2
help on Venn's diagram
Hello! I have this problem: I want to create a Venn's diagram with three lists of genes'names. The first is all the genome, the second a subset of it comprising all mitochondrial genes, and the third including all genes that correlate with a given gene. This is what I do: > library(gplots) > A<-read.delim("F:/.../mito genes just names.txt") >
2012 Jan 30
3
Venn Diagram help!!!!
Hi there ! I've got 7 Samples that may contain 29 differents kinds of material.... every line below corresponds to a differente kind of material, example: Sample 1, 2,3,5 and 6 has material 1 .... So I want to know how can I do a Venn Diagram with the data below .... ps ( it was generated by a csv, where every line is sep with (";")) Can someone helps me ? thanks csv file :