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...showing error.. Error in library(hopach) : there is no package called 'hopach' Does it mean this library hopach is not installed. But I have installed complete Bioconductor package. I am confused. can you help me in this thanks Regards, -- Prateek Singh Final year Bioinformatics(BTech) Vellore Institute Of Technology Vellore-632014 ph.no. 09952187800 prateek.vit at gmail.com

...ary in windows also). I had run the command Rcmd in bin directory but an error message "bash: Rcmd: command not found" is produced. Thank You With Regards, Regina -- regina.verghis@gmail.com Regina M.Verghis, Post Graduate Student Department of Biostatistics, Christian Medical College, Vellore, Tamilnadu- 632002 India. [[alternative HTML version deleted]]

....hobj <- hopach(t(GSE), dmat=gene.dist, mss="med") labelstosil(gene.hobj$cluster$label,gene.dist) I dont know how to run it on linux terminal. Can you tell me how to execute this file. I am using Debian linux. Regards, Praeek Singh -- Prateek Singh Final year Bioinformatics(BTech) Vellore Institute Of Technology Vellore-632014 ph.no. 09952187800 prateek.vit at gmail.com

...lusters. What I am getting as MSS value, is Mean of all SS value of individual cluster. Hence I am getting single value for a gene set. But I would be very helpful for me if I get silhouette value for individual clusters. Regards, Prateek Singh. -- Prateek Singh Final year Bioinformatics(BTech) Vellore Institute Of Technology Vellore-632014 ph.no. 09952187800 prateek.vit@gmail.com [[alternative HTML version deleted]]

...usr/local/lib/R/library' ERROR: No packages specified. Can you tell me the problem? How can I rectify that? With Regards, Regina M.Verghis -- regina.verghis@gmail.com Regina M.Verghis, Post Graduate Student Department of Biostatistics, Christian Medical College, Vellore, Tamilnadu- 632002 India. [[alternative HTML version deleted]]

...arkov Chain.Can you tell me a standard book on HMM which have the corresponding R codes. I will be grateful for the help extended. Thanking You, Yours Faithfully, Regina -- regina.verghis@gmail.com Regina M.Verghis, Post Graduate Student Department of Biostatistics, Christian Medical College, Vellore, Tamilnadu- 632002 India. [[alternative HTML version deleted]]

hi ambika, I am not sure about this solution as i just started working in this field. How about taking analogy of a problem which ask us to find nearest common parent of two nodes in a tree. Let me know if I can be corrected. - Anubhav intern IIT M B. Tech 4th year CSE VIT University, Vellore. On 31 May 2010 22:30, <llvmdev-request at cs.uiuc.edu> wrote: > Send LLVMdev mailing list submissions to > llvmdev at cs.uiuc.edu > > To subscribe or unsubscribe via the World Wide Web, visit > http://lists.cs.uiuc.edu/mailman/listinfo/llvmdev > or, via ema...