search for: vegdata

Thanks for the gracious assistance in advance I'm working on a non-metric scaling problem and am calculating the distance for input to isoMDS Here is the code library(MASS) vegdata <- tapply(Percent, list(PRIMARY_VE, MASTERID), sum) x.mat <- matrix(x, nrow=40, ncol=2750, byrow=TRUE, dimnames = c(dimnames(x)[1], dimnames(x)[2])) vegdata.dd <- dist(x) vegdata.dd <- ifelse(vegdata.dd==NA, 0.01, x.dd) vegdata.dd Everything works as expected until I try to repla...

Hi R experts, I'm looking for some help with plotting vectors from envfit in vegan, onto a 3d plot using ordiplot3d. So far I have data.mds <- metaMDS(data, k=3,trace = FALSE) vect_data<-envfit(data.mds,vegdata[,3:21],choices=1:3,permu=9999) ordiplot3d(data.mds,envfit=vect_data) ordixyplot(data.mds,pch=pts,envfit=vect_data) (my data's not really called data, I thought it might be easier to communicate this way) These display the vectors as arrows, but what I would really like is for the arrows to be...

CRAN (and crantastic) updates this week New packages ------------ * EffectStars (1.0) Maintainer: Unknown Author(s): Gunther Schauberger License: GPL-2 http://crantastic.org/packages/EffectStars The package provides functions to visualize regression models with categorical response. The effects of the covariates are plotted with star plots in order to allow for an optical

....5-1), TSpadi (2010.5-1), TSPostgreSQL (2010.5-1), TSSQLite (2010.5-1), ttime (1.2), ttutils (1.0-1), tuneR (0.3-0), twitteR (0.1.6), udunits (1.3.1), umlr (0.3.0), uncompress (1.33), unmarked (0.8-6), untb (1.6-3), vardiag (0.1-3), varSelRF (0.7-2), vbmp (1.16.0), vcdExtra (0.5-0), vegan (1.17-3), vegdata (0.1.5), venneuler (1.0-2), VGAM (0.8-1), vowels (1.1), VPdtw (2.1-6), vrmlgen (1.4.4), wavelets (0.2-6), waveslim (1.6.4), wavethresh (4.5), wgaim (0.99-1), wle (0.9-4), WMCapacity (0.9.5.0), wmtsa (1.0-5), wordnet (0.1-6), xlsx (0.2.1), xlsxjars (0.2.0), XML (3.1-0), xts (0.7-1), yaImpute (1.0-11...