search for: utrs

# I have a simple function problem. I thought that I could write a function to modify a couple of vectors but I am doing something wrong #I have a standard cost vector called "fuel" and some adjustments to the #costs called "adjusts". The changes are completely dependend on the length #of the dataframe newdata I then need to take the modifed vectors and use # them later. I

Hi all, In short: I'm running ddply on an admittedly (somehow) large data.frame (not that large). It runs fine until it finishes and gets to the "collating" part where all subsets of my data.frame have been summarized and they are being reassembled into the final summary data.frame (sorry, don't know the correct plyr terminology). During collation, my R workspace RAM usage goes

We (the lme4 authors) are having a problem with doing a proper deep copy of a reference class object in recent versions of R-devel with the LAZY_DUPLICATE_OK flag in src/main/bind.c enabled. Apologies in advance for any improper terminology. TL;DR Is there an elegant way to force non-lazy/deep copying in our case? Is anyone else using reference classes with a field that is an external pointer?

Hi all, I have developed a full featured Windows IAX phone based on LIBIAX library . It is now in a prerelease version (0.9.0) and you can download it for free from my web page: http://www.laser.com/dante or http://www.geocities.com/tdanro Some of the features are: - registering with Asterisk PBX; - can use any audio device as ring device (including PC speaker), independent of the play device;

Hi All, I wonder if there should be one character for quote= in read.table, i.e., > args(read.table) function (file, header = FALSE, sep = "", quote = "\"'", dec = ".", ... I have a file containing the following lines, 08248-GOTERM 3'-phosphoadenosine 5'-phosphosulfate biosynthetic process 08279-GOTERM 3'-phosphoadenosine

Hello Everyone: I'm hoping to get some suggestions on this problem i'm having with subsetting on an R object i've created. I would really appreciate any advice. I've created this simple S3 class: >str(ans) Class 'myObj' atomic [1:45000] 0.0428 0.0423 0.0554 0.0338 0.0345 ... ..- attr(*, "Size")= int 10 ..- attr(*, "Region")= chr

...re my data: "Our data are consistent with those obtained using microarray comparative genome hybridization in that we found significantly fewer variants per Mb on the X compared to the autosomal chromosomes (152 versus 336 respectively, G = 93.4, P < 2e-16, df = 1), and in exons (including UTRs) compared to non-exonic regions (69 versus 392 respectively, G = 14,226, P < 2e-16, df = 1)." How do I have to write the input? Should I have to include any total number (in this case Mb) minus the variants? g.test(rbind(c(152,(999848)),c(336,(999664))), correct = "williams") or...

Hi, I can run the code some days ago . But cant run now.  Problem 1: Output is ok ensembl = useDataset("hsapiens_gene_ensembl",mart=ensembl) utr5 = getSequence(chromosome=3, start=185514033, end=185535839, type="entrezgene",seqType="5utr", mart=ensembl)  Output :                                                                                                5utr

Hello, I am new to R and still feeling my way thru it. I am trying to plot the values from this file below on the X-axis of a plot. I have attached the graph to the email...the one i am trying to recreate. Exon start end 5'UTR 22540060 22540121 1 22540122 22540140 2 22540303 22540493 3 22541552 22541565 4 22542373 22542519 5 22544265 22544432 3'UTR 22544433 22544856 I would like to

Hi, I'm using R-2.12 on a linux 64bit machine. When I run a chunk of code inside a foreach() %do% { ...} or %dopar% {...} (with doMC backend) I keep getting a segfault. Running the *same* code within lapply(something, function(x) ... ) doesn't result in any segfaults. I'll paste the output below, but I'm not sure it would be helpful. I'm more curious how to go about smoking

On 04.06.2017 11:50, jing hua zhao wrote: > Hi All, > > > I wonder if there should be one character for quote= in read.table, i.e., > > >> args(read.table) > function (file, header = FALSE, sep = "", quote = "\"'", dec = ".", > ... > > I have a file containing the following lines, > > > 08248-GOTERM

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Gracias a todos por las recomendaciones. Ya me he puesto en contacto con el autor y le explicado donde esta el error. Es tan fácil como que han cambiado la estructura de los objetos tipos lmer desde la versión 2.15.3 con lo que su paquete dejo de funcionar. Por suerte la nueva estructura conserva por lo menos la parte necesaria para hacer sus funciones. Se localizar el fallo y como arreglarlo, lo

Javier, Creo que aquí aplica la ley de Linus que dice: "Dado un número suficientemente elevado de ojos, todos los errores se convierten en obvios". La persona que revisa y encuentra un error no necesariamente tiene que ser la misma que la que lo escribe. Una motivación muy importante al compartir un código es la de recibir los beneficios del control de calidad por parte de tus pares.

Hace unos meses os escribir para comunicaros que había un fallo en esta función. Como os prometí os comento la respuesta por si alguno está interesado en utilizar el paquete LMERconvenientsfucntions Dear Javier, The package has been updated and should work for you fine now. Note that function mcp.fnc does not return the fourth plot (dffits) anymore. We still have to figure out a way to compute

Hi. To begin with, I have a freshly built RedHat Linux 8.0 box running samba 2.2.8a. The kernel version is 2.4.18-14. I downloaded and compiled samba from source. I am using LPRng-3.8.9-6 as my printing system. The attached printer is a Lexmark Z22 printer and it is attached to the parralel port. Problem: For the life of me, I can't get NT type clients, NT4, 2K and XP to print to samba.