search for: unstat

...stated dependencies ... WARNING Error in doTryCatch(return(expr), name, parentenv, handler) : could not find function "packageDescription" Error in library(R.oo) : .First.lib failed for 'R.oo' Execution halted It looks like this package (or one of its dependent packages) has an unstated dependence on a standard package. All dependencies must be declared in DESCRIPTION. See the information on DESCRIPTION files in the chapter 'Creating R packages' of the 'Writing R Extensions' manual. I found the following comment in NEWS.R-2.5.0dev under "CHANGES IN R VERSI...

Using R 2.13.1, I am now getting the following NOTE when I run R CMD check on my HistData package * checking for unstated dependencies in examples ... NOTE 'library' or 'require' calls not declared from: gplots sp Under R 2.12.x, I didn't get these notes. I have ~ 25 .Rd files in this package, and AFAICS, every example uses library or require for the functions used; the DESCRIPTION file ha...

...################################ options(useFancyQuotes=F) ################################################### ### code chunk number 2: data1 ################################################### library(foreign) therms <- na.omit(read.dta("http://quantoid.net/936/2008_difftherm.dta")) unstate <- unique(therms[,1]) therms$numstate <- match(therms$state, unstate) library(runjags) dat <- dump.format(list( N = nrow(therms), J=length(unstate), y = therms$difftherm, numstate = therms$numstate )) ################################################### ### code chunk number 3: exch...

For many months I've been trying to replace a Samba 3.0 Domain Controller with a version that will support Windows 7. Despite advice on Samba HOWTO that all supported versions will support Windows 7 there seems to be an unstated caveat, namely that it must be configured as an Active Directory Domain Controller. Microsoft's own advice is that Windows 7 will not work with a Windows NT domain controller and is not intended to do so. By itself, that would not be an obstacle, but there another (stated) caveat that runnin...

i am using mac OSX 10.7.5, running R version 2.15.2 (2012-10-26) -- "Trick or Treat" when i do: uncountry <- unique(wvsAB[,7]) wvsAB$numcountry <- match(wvsAB$country, uncountry) "unstate" isn't attaching. > library(base) > uncountry <- unique(wvsAB[,7]) > wvsAB$numcountry <- match(wvsAB$country, uncountry) > ls(wvsAB) [1] "age" "country" "cpi" "dem" "diversity" "educ"...

...og directory 'C:/eclipse-3.7/heplots.Rcheck' * using R version 2.15.0 (2012-03-30) * using platform: i386-pc-mingw32 (32-bit) ... * checking sizes of PDF files under 'inst/doc' ... OK * checking installed files from 'inst/doc' ... OK * checking examples ... OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes in 'inst/doc' ... OK * checking running R code from vignettes ... 'HE-examples.Rnw' ... OK 'repeated.Rnw' ... OK ... However, on R-Forge and on CRAN, the following error/warning is generated: Mon Jun 4 20:18:...

...get the whole Hmisc package, so that is not the way to go ahead. 2) According to "Writing R extensions", sec 1.6.1 "Specifying imports and exports" I can (as I read it) simply type Hmisc:::mApply(....) in my code. That works, but gives a warning in the check: * checking for unstated dependencies in R code ... WARNING '::' or ':::' imports not declared from: Hmisc 3) According to the same section I can (again as I read it) write in the NAMESPACE file importFrom(Hmisc,mApply) Then I get: * checking package dependencies ... ERROR Namespace dependencies n...

...The behavior of the call depends on the function called even though none of the functions I have tested played with the exception mechanism--fprintfs and C functions with static variables initialized in a certain way do the trick. I am assuming that this is not a bug but rather that there is an unstated requirement that llvm.eh.exception, and llvm.eh.selector must be the first calls in any landing pad. Is this true? I ask because I am trying to isolate code to prove to myself that I am not introducing a bug causing this before I go off and start tracing through llvm dwarf emission. http://llv...

...for R CMD check. The function tools:::.check_packages_used_in_tests Gives an apparently unintended error when checking the tests in the contributed package rcdd_1.1-3.tar.gz as found on CRAN. See the script below for details. The actual error reported is totally mysterious. * checking for unstated dependencies in tests ... NOTE Error in as.character(function (description = "", open = "", blocking = TRUE, : cannot coerce type 'closure' to vector of type 'character' Calls: <Anonymous> ... tryCatch -> tryCatchList -> tryCatchOne -> <An...

...OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking for unstated dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ......

...checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking for unstated dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... WARNING Rd files with duplicated alia...

...re because of out very international membership! In the French sentence "Les taux de tirage sont calcul??s de mani??re ?? ce que la dispersion soit inf??rieure ?? 5 % dans chaque strate." it would seem intended that the "dispersion" is to be calculated in a specific way (unstated) -- otherwise, how to ensure that it shall be less than 5%? So my question is: What, in English, would one use for "dispersion"? Standard deviation? Just as in English, also in general French usage in statistics, "dispersion" is a general term for which one can adopt variou...

...I really don't want to force users of the tis package to have to install ggplot2. What can I do? Is it enough to have Imports: ggplot2 in the DESCRIPTION file and import(ggplot2) in the NAMESPACE file? I've done that, but I still get this warning from R CMD check: * checking for unstated dependencies in R code ... WARNING 'library' or 'require' calls not declared from: ggplot2 See the information on DESCRIPTION files in the chapter 'Creating R packages' of the 'Writing R Extensions' manual. Well, I did read the manual, and it seems to say that w...

...OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking for unstated dependencies in R code ... OK * checking S3 generic/method consistency ... WARNING gamma: function(x) gamma.dist: function(x, alpha, beta, observed) See section ?Generic functions and methods? of the ?Writing R Extensions? manual. * checking replacement functions ... OK * checking foreign fu...

...* checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK ** checking whether the namespace can be loaded with stated dependencies ... OK ** checking whether the namespace can be unloaded cleanly ... OK * checking for unstated dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ......

...checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking for unstated dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... NOTE prcurve: no visible global function definition for ?pcget.lam? * checking Rd files ... NO...

...de of the apps as well? > No, but it would be very easy to do: just write a function that tests > those things, and call it from a script in the tests directory. Yes, though in this case tests would merely check that the code can be sourced without error. I was thinking more of looking for unstated dependencies in code effectively used by the package, though indirectly. I guess it is only relevant if distributing shiny apps alongisde packages becomes common practice. I am not sure how trendy it is yet, but wouldn't be surprised to see it become increasingly frequent. Cheers Thibaut &...

Hi the list. I got a probleme with R CMD check. I run a package.skeleton on a very simple code (four toy function, no probleme with the R CMD build). But on the R CMD check packClassique, I get : * checking for unstated dependencies in R code ... WARNING Erreur dans .find.package(package, lib.loc) : aucun package nomm? 'packClassique' n'est trouv? Calls: <Anonymous> -> .find.package Excecution hated [French=Ex?cution arr?t?e] See the information on DESCRIPTION files in the chapter 'Cr...

...RIPTON file. In one of my package functions I am using RODBC so I have a line of code that reads: require(RODBC). In my DESCRIPTION file I have the following relevant line: Depends: R (>= 2.9.0), RODBC However, when I do a check (Rcmd check my_package_name) I get this warning: * checking for unstated dependencies in R code ... WARNING 'library' or 'require' calls not declared from: RODBC See the information on DESCRIPTION files in the chapter 'Creating R packages' of the 'Writing R Extensions' manual. Does anyone know where I have gone astray? Thank you. Je...

Hi, I got two errors after i checking my package. The errors are as follows, Error1: * checking for unstated dependencies in R code ... WARNING 'library' or 'require' calls not declared from: boot np Error2: * checking R code for possible problems ... NOTE myfunction: no visible global function definition for 'npudensbw'in the np package In "myfunction", i have tw...