Displaying 20 results from an estimated 105 matches for "unserializer".
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unserialize
2018 Nov 07
2
error unserializing ascii format (v2 or v3)
I ran into an interesting error unserializing a file created with
ascii=TRUE:
R 3.5.1 (Windows or Linux):
> unserialize(serialize(list(raw=as.raw(c(39,41))), NULL, version=2,
ascii=TRUE))
Error in unserialize(serialize(list(raw = as.raw(c(39, 41))), NULL,
version = 2, :
ReadItem: unknown type 29, perhaps written by later version of R
The same error happens when the
2018 Nov 08
0
error unserializing ascii format (v2 or v3)
I see this on MacOS as well, so likely not platform dependent.
A little more diddling to try to narrow it down:
> unserialize(serialize(as.raw(1), NULL, version=2, ascii=TRUE))
[1] 30
> unserialize(serialize(list(as.raw(1)), NULL, version=2, ascii=TRUE))
[[1]]
[1] 30
> unserialize(serialize(list(raw=as.raw(1)), NULL, version=2, ascii=TRUE))
Error in unserialize(serialize(list(raw =
2011 Dec 06
1
unserialize and eager execution
Hi,
While debugging a network server I'm developing I noticed something unusual
- call to unserialize() resulted in
an error about loading a namespace.
I was a bit taken back by this - why should unserializing an object cause a
namespace lookup?
Are there any other side-effects of unserialize() that I should be cautious
about? I've been
digging through the R_Unserialize() call, I
2020 Oct 29
2
Something is wrong with the unserialize function
Hi all,
I am not able to export an ALTREP object when `gctorture` is on in the
worker. The package simplemmap can be used to reproduce the problem. See
the example below
```
## Create a temporary file
filePath <- tempfile()
con <- file(filePath, "wrb")
writeBin(rep(0.0,10),con)
close(con)
library(simplemmap)
library(parallel)
cl <- makeCluster(1)
x <- mmap(filePath,
2018 Jun 21
1
DOCUMENTATION(?): parallel::mcparallel() gives various types of "Error in unserialize(r) : ..." errors if value is of type raw
I stumbled upon the following:
f <- parallel::mcparallel(raw(0L))
parallel::mccollect(f)
# $`77083`
# NULL
but
f <- parallel::mcparallel(raw(1L))
parallel::mccollect(f)
# Error in unserialize(r) : read error
traceback()
# 2: unserialize(r)
# 1: parallel::mccollect(f)
(restarting because the above appears to corrupt the R session)
f <- parallel::mcparallel(raw(2L))
2020 Oct 29
2
[External] Something is wrong with the unserialize function
This
Index: src/main/altrep.c
===================================================================
--- src/main/altrep.c (revision 79385)
+++ src/main/altrep.c (working copy)
@@ -275,10 +275,11 @@
SEXP psym = ALTREP_SERIALIZED_CLASS_PKGSYM(info);
SEXP class = LookupClass(csym, psym);
if (class == NULL) {
- SEXP pname = ScalarString(PRINTNAME(psym));
+ SEXP pname =
2020 Oct 29
0
[External] Something is wrong with the unserialize function
Thanks for the report. Will look into it when I get a chance unless
someone else gets there first.
A simpler reprex:
## create and serialize a memmory-mapped file object
filePath <- "x.dat"
con <- file(filePath, "wrb")
writeBin(rep(0.0,10),con)
close(con)
library(simplemmap)
x <- mmap(filePath, "double")
saveRDS(x, file = "x.Rds")
## in a
2012 Jan 09
1
serializing recordedplot object
I use recordPlot() to save plots to disk that I render later to a
variety of formats. This works fine for base R plots and ggplot2
plots, and also used to work for lattice plots. However somewhere in
version 2.14 things stopped working for lattice plots. Here is an
example:
library(lattice);
histogram(rnorm(100));
x <- recordPlot();
saveRDS(x, "myplot.rds");
y <-
2011 Sep 28
1
serialize/unserialize vector improvement
Hi folks,
I've attached a patch to the svn trunk that improves the performance
of the serialize/unserialize interface for vector types. The current
implementation: a) invokes the R_XDREncode operation for each element
of the vector type, and b) uses a switch statement to determine the
stream type for each element of the vector type. I've added
R_XDREncodeVector/R_XDRDecodeVector functions
2020 Oct 29
0
[External] Something is wrong with the unserialize function
I found that also; fixed in r79386 in the trunk. Will port to R-patched
shortly.
Best,
luke
On Thu, 29 Oct 2020, Martin Morgan wrote:
> This
>
> Index: src/main/altrep.c
> ===================================================================
> --- src/main/altrep.c (revision 79385)
> +++ src/main/altrep.c (working copy)
> @@ -275,10 +275,11 @@
> SEXP psym =
2013 Jul 15
2
Serialize data.frame to database
Dear R-Users,
I need a very fast and reliable database solution so I try to serialize a data.frame (to binary data) and to store this data to an SQLite database.
This is what I tried to do:
library(RSQLite)
con <- dbDriver("SQLite")
db <- dbConnect(con, "test")
dbSendQuery(db, 'CREATE TABLE frames("simID" INT, "data" BLOB)')
data.bin <-
2005 Dec 12
2
Can you unserialize an object from the db?
I don''t even know if this is possible. I want to use an object as an
attribute for one of my classes. I can save it to the db fine, looks
like...but I need to be able to use it after I pull the object from
the db. Right now the attribute is just a String, but I need it to be
a Runt::Intersect object. Does anyone know how I can unserialize the
attribute so I can use it as an object?
2008 Sep 25
1
Saving R-objects to a database
Someone solved the problem of saving R-objects to a database?
These are the two varaints I've tried so far without success:
1)
ser = rawToChar(serialize(obj, NULL, ascii=TRUE))
dbSendQuery(link, paste("insert into table values(1, '",ser,"')",sep=''))
The field to save the object in the MySQL Database is of type text.
unser = dbGetQuery(link,"select
2008 Jul 31
2
C versions of serialize/unserialize in packages
Are the functions 'R_Unserialize' and 'R_InitFileInPStream' allowed to
be used in R packages? I guess I'm just not clear on the implications
of this comment in 'Rinternals.h':
/* The connection interface is not yet available to packages. To
allow limited use of connection pointers this defines the opaque
pointer type. */
I have a function in the
2012 Aug 31
3
Arrays Partial unserialization
Hi all,
I'm working with some huge array in R and I need to load several ones to
apply some functions that requires to have all my arrays values for each
cell...
To make it possible, I would like to load only a part (for example 100
cells) of all my arrays, apply my function, delete all cells loaded,
loaded following cells and so on.
Is it possible to unserialize (or load) only a
2010 Jul 17
1
bug in identical()? [Was: [R-sig-ME] Failure to load lme4 on Mac]
Daniel,
thanks for the test case. I did run it in valgrind but nothing showed up, however ...
I'm starting to have a suspicion that this has something to do with identical() - look at this:
> identical(M1,M2)
[1] FALSE
> all(serialize(M1,NULL)==serialize(M2,NULL))
[1] TRUE
> identical(unserialize(serialize(M1,NULL)),unserialize(serialize(M2,NULL)))
[1] FALSE
>
2008 Nov 30
1
Rserve and creating a list of lists
Hello,
I have some code which generates lattice objects. The function
recieves serialized forms of the lattice objects which it then
unserializes and then adds to an ArrayList<REXP>.
REXPRaw rser = new REXPRaw( target ); //target contains the raw
serialized forms of lattice objects
rconn.assign("temp",rser);
REXP ret =
2024 May 13
1
[External] R hang/bug with circular references and promises
On Mon, 13 May 2024 09:54:27 -0500 (CDT)
luke-tierney--- via R-devel <r-devel at r-project.org> wrote:
> Looks like I added that warning 22 years ago, so that should be enough
> notice :-). I'll look into removing it now.
Dear Luke,
I've got a somewhat niche use case: as a way of protecting myself
against rogue *.rds files and vulnerabilities in the C code, I've been
2006 May 19
2
Icecast2 Status Page Parser
Does anyone have a Perl or PHP Icecast2 Status Page Parser?
Thanks.
-greg.
__________________________________________________________________________
Greg J. Ogonowski
VP Product Development
ORBAN / CRL, Inc.
1525 Alvarado St.
San Leandro, CA 94577 USA
TEL +1 510 351-3500
FAX +1 510 351-0500
greg@orban.com
http://www.orban.com
2013 Mar 05
0
unserializing hash with unquoted strings
Hi all,
I''ve recently upgraded a rails 3.0.20 app to 4.0.0.beta1 and realize that
the serialize function must have changed in between (not sure if related to
json security fixes).
In the MySQL database I have for the serialized column:
---
id: 6695079125_10151776148744126
In rails 3 this would be parsed back as string
("6695079125_10151776148744126") while in rails 4