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Hello I'm trying to calculate 2d confindence bounds into a scatterplot using the function "kde2d" (package MASS) and a contour plot. I found a similar post providing a solution - unfortunatly I do not realy understand which data I have to use to calculated the named "quantile": Post URL: http://tolstoy.newcastle.edu.au/R/help/03b/5384.html > (...) > >> Is

am I right in the assumption, that for calculation of the condition numbers I have to use the correlation matrix of X, and not t(x) %*% x? > e <- eigen(t(x) %*% x) better (x must not have a first column of ones): > e <- eigen(cor(x)) > e$val [1] 6.6653e+07 2.0907e+05 1.0536e+05 1.8040e+04 2.4557e+01 2.0151e+00 > sqrt(e$val[1]/e$val) [1] 1.000 17.855 25.153 60.785 1647.478

Dear List, I''m thinking about using xen productive in our datacenter, i''m still testing around with it. Now I got some questions, just for basic understanding, we got for example this environment: 2 Nodes 1 SCSI Pool server (Connected via scsi to both nodes) Now I want to build a "cluster" so i would like to make this: Node 1 -> Primary -| | --> domU

Dear All, I got these results from the example in the function "dbeta": >x <- seq(0, 1, length=21) > dbeta(x, 1, 1) [1] 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 Any Idea? TIA Giovanni dr. Giovanni Parrinello Section of Medical Statistics Department of Biosciences University of Brescia 25127 Viale Europa, 11 Brescia Italy Tel: +390303717528 Fax: +390303701157

I am just about working through Faraways excellent tutorial "practical regression and ANOVA using R" on page 24 he makes the x matrix: x <- cbind(1,gala[,-c(1,2)]) how can I understand this gala[,-c(1,2)])... I couldn't find an explanation of such "c-like" abbreviations anywhere. thanks for a hint. another problem: I couldn't load the faraway library, using the

Hello everybody, I have a question. I would like to get a correlation between constitutive and induced plant defence which I messured on 30 plant species. So I have table with Species, Induced defence (ID), and constitutive defence (CD). Since Induced and constitutive defence are not independant (so called spurious correlation) I should do a randomisation test. I have a syntax of my

Hi I tried to customize help(), so it starts the compiled html help, and searches in all packages. I wrote the following function: > my.help function(topic){ help(topic, package=.packages(all=T), lib.loc=.lib.loc, chmhelp=T) } When I use it with >my.help(help) give the following error: Error in help(topic, package = .packages(all = T), lib.loc = .lib.loc, : No documentation

https://bugzilla.mindrot.org/show_bug.cgi?id=2972 Bug ID: 2972 Summary: Add build-time option to use OpenSSL for ChaCha20-Poly1305 Product: Portable OpenSSH Version: 7.9p1 Hardware: ARM OS: Linux Status: NEW Severity: enhancement Priority: P5 Component: Miscellaneous

...oduct: Portable OpenSSH Version: 7.7p1 Hardware: All OS: All Status: NEW Severity: enhancement Priority: P5 Component: Miscellaneous Assignee: unassigned-bugs at mindrot.org Reporter: fabio.pedretti at unibs.it I did some test and when enabling compression my CPU usage goes at 100% at about 70-150Mb/s, depending on file compressibility. So it is not very useful with a Gigabit Ethernet link. To improve this I would propose to add other compression schemes, such as lz4 ( https://github.com/lz4/lz4 ) or...

Dear R-users I would like to draw a barplot with a special y-axis. Most of my data points are in the range from -50 to 50, apart from one value that is 550. I would now like to have a y-axis from -50 to 50, then a "break" and the "rest" of the y-axis, let's say from 500 to 600. In order to make clear what I'm trying to do, I attached a figure. Is it possible to do

Christoph -- There was just a thread on this earlier this week. You can search in the archives for the title: "refitting lm() with same x, different y". (Actually, it doesn't turn up in the R site search yet, at least for me. But if you just go to the archive of recent messages, available through CRAN, you can search on refitting and find it. The original post was from William

Hello, I am planning a study with the main point to evaluate the interaction of two treatments, but for ethical reasons one cell is empty, that with patients receaving no treatment at all Treatment B

Dear R people I came across a strange thing: sd(rep(0.01, 15)) #0 sd(rep(0.001, 15)) #4.489023e-19 sd(rep(0.00001, 15)) #0 sd(rep(0.00000001,15)) #1.712427e-24 sd(rep(0.01, 13)) #1.805557e-18 sd(rep(0.001, 13)) #4.513894e-19 sd(rep(0.00001, 13)) #0 sd(rep(0.00000001,13)) #0 sd(rep(5.01, 15)) #0 sd(rep(5.001, 15)) #4.489023e-19 sd(rep(5.00001, 15))

Dear all, I've sent this question to the r-help mailing list, but maybe it is better suited for the r-sig-debian mailing list, although this is not Debian (but still Linux): I am using Cairo version 1.4-5 for plotting R graphs on a Gentoo system that does not have X11 installed. I have full control on the fonts when running R in interactive mode. But when running R in batch mode I cannot

...he library QVF [ NONLINEAR MEASUREMENT ERROR PROGRAMS FOR SAS AND SPLUS ]. TIA Giovanni Parrinello dr. Giovanni Parrinello Medical Statistics Unit Department of Medical Sciences University of Brescia Via Valsabbina, 19 25127 Brescia Italy tel.: +39303717528 fax:+39303701157 E-mail: parrinel at med.unibs.it url: http://www.med.unibs.it/dip/stat/index.html -.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.- r-help mailing list -- Read http://www.ci.tuwien.ac.at/~hornik/R/R-FAQ.html Send "info", "help", or "[un]subscribe" (in the "body&q...

Sorry, I am sure, this must be documented somewhere (but there are that many docs and tutorials to scan for topics..., actually a great thing... but if you are in a hurry..): I want to save a plot as .ps (or .eps): > postscript("plot1.eps", horizontal=FALSE, onefile=FALSE,height=8,width=8,pointsize=10) > plot(hpfit$fit,rstudent(hpfit),xlab="Fitted

Hi I need to overlay two pixmaps (library (pixmap)). One, a pixmapGrey, is the basis, and on this I need to overlay a pixmapIndexed, BUT: the pixmapIndexed has set only some of its "pixels" to an indexed color, many of its pixels should not cover the basis pixmapGrey pixel, means, for this "in pixmapIndexed not defined pixels" it should be transparent. What would you

Dear all I have a big matrix of standardized values (dimensions 285x5829) and R fails to calculate the principal components using prcomp() with the following error message: pc <- prcomp(my.matrix) Error in La.svd(x, nu, nv, method) : error code 1 from Lapack routine dgesdd Is the matrix too big? I'm using R-1.8.1 under Unix (Solaris8) and Linux(Suse 8.2). I tried to perform a principal

Dear List, somebody knows, if the following operation can be done in an easier way? The data rows which should be read into R look like that: 4547;1970.01.01 00:00-1970.01.01 01:00; noData Unitil now we are doing this procedure: 1. Dividing columns which are separated by ";" => temp <- read.table(file ,sep=';', na.strings='noData', strip.white=TRUE) =>

...of the Appell Hypergeometric function. Any suggestions will be more than appreciated! GP -- dr. Giovanni Parrinello External Lecturer Medical Statistics Unit Department of Biomedical Sciences Viale Europa, 11 - 25123 Brescia Italy Tel: +390303717528 Fax: +390303717488 email: parrinel at med.unibs.it