Displaying 18 results from an estimated 18 matches for "ulim".
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2012 Jan 27
1
Help boxplot to add mean, standard error and/or stadard deviation
Dear researchers
I wish to plot a box plot without the mean line (the black line) and plot
only the mean (red square). Futhermore, is it possible to add standard
error and/or stadard deviation?
This is an example
mytest <- c(2.1,2.6,2.7,3.2,4.1,4.3,5.2,5.1,4.8,1.8,1.4,2.5,2.7,3.1,2.6,2.8)
boxplot(mytest,lty = "solid")
means <- mean(mytest,na.rm=TRUE)
points(means, pch = 22, col
2011 Oct 16
2
How to plot CI's (llim ulim) on ecodist mgram
...e in order to plot them?
package(ecodist)
X<-1:100
Y<-rnorm(1:100)
Z<-rnorm(1:100)
XY<-dist(data.frame(X,Y))
YX<-dist(data.frame(Y,X))
my.mgram<-mgram(XY,XZ)
plot(my.mgram)
print(my.mgram)
> print(my.mgram)
$mgram
lag ngroup mantelr pval llim ulim
[1,] 3.770055 672 0.500012737 0.001 0.49689923 0.504301550
[2,] 11.310165 691 0.383960457 0.001 0.38000201 0.387324434
[3,] 18.850274 584 0.232086251 0.001 0.22670074 0.237501735
[4,] 26.390384 587 0.114097397 0.001 0.10243901 0.122973735
[5,] 33.930494 463 -0....
2000 Sep 20
1
integration in R?
I have the following problem.
inf
p= Int [dnorm(x-d) * pnorm(x) ^ (m-1)] dx
-inf
Given p and m, I want to find d. For example,
p m d
.9 2 1.81
Is there a way to solve this problem in R? Ideally I would have a
function with arguments p and m, and output d.
Thanks very much for any help.
Bill
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r-help mailing
2007 Nov 15
0
Vista Ulimate joining Samba-Domain
Hi list,
I have a question concerning a MS Vista Ultimate-Client which I already
have joined with a Samba-Domain (3.0.26a), and I do hope that anyone can
help me or can give me a hint where to proceed my search.
My problem is, that the logon process on this Vista-Client is very long
(~1-2 min.). After switching to the detailed logon view, I can see, that
Vista displays the (german) messages
2009 Apr 07
1
get optim results into a model object
...malization" fun to make the rest of the x's add up to 1
normalize=function(x)c(x[1], x[2:length(x)]/sum(x[2:length(x)]))
# objective function:
fn=function(ws){
ws=normalize(ws)
sum((x %*% ws - yhat)^2)}
llim = c(-Inf,rep(0,ncol(x)-1)) # alpha (col 1 of 'x') is -Inf to Inf
ulim = c( Inf,rep(1,ncol(x)-1)) # betas (cols 2:4 of 'x') are 0 to 1
th=matrix(c(0,rep(1/3,3)))
o = optim(th, fn, method="L-BFGS-B",lower=llim, upper=ulim)
o
REALPAR = normalize(o$par)
REALPAR
[[alternative HTML version deleted]]
2005 Feb 17
1
Factor level coloring in trellis plot
Hi :)
Was just wondering whether someone could help me with
adjustments to trellis plots (parallel).
I've got two way multivariate data. I want to make
parallel plots for one of the factors, and want to color
the lines according to the other factor. The first thing I
manage, but with the other I'm lost :( Can only change the
overall color.
This is basically how far I get:
2009 Jul 09
2
naming of columns in R dataframe consisting of mixed data (alphanumeric and numeric)
...2.
Notice that column 1 does not have a column heading.
Tresults2:
[,1]
estparam 18.00000
nullval 20.00000
. . .
ciWidth 2.04622
HalfInterval 1.02311
pertinent code:
results<-cbind( estparam, nullval, t, pv_left, pv_right, pv_two_t,
estse, df, cc, tbox, llim, ulim, ciWidth, HalfInterval)
tresults<-round((results),5)
tresults2<-data.frame(t(tresults))
names(tresults2)<-c("Statistic ", "Value")
tresults2
===========================================================================================
After transposing my dataframe tresu...
2010 Oct 26
1
Dispersion ( Plot error bars ) help
Dear List,
I am looking to plot error bars on a line using dispersion.
I have values for the upper value and for the lower values, however i am unsure how to plot different values for the upper CI and the lower CI?
I have been using
dispersion(1:35,sim,simCI,col="red")
Where there are 35 points, and simCI relates to a vector containing the lower confidence intervals, however i want
2006 May 31
1
Phrase Query vs AND Query? Why don't these find the same things?
...5]
LP:table-add-column-after-hover.gif [6]
MBOX:12345678-1234-1234-1234-1234567890ab
MDATE:1135755971 (Wed, 28 Dec 2005 07:46:11 GMT)
MIME:application/octet-stream
NAME:table-add-column-after-hover.gif
TYPE:0 (file)
anyone have any ideas how to get a PHRASE QUERY to return the data?
also what will ulimate be "better" given the context of these queries, the
AND QUERY or the PHRASE QUERY?
2009 Nov 06
1
Survival Plot in R 2.10.0
...age:utils" "package:datasets" "package:methods"
[10] "Autoloads" "package:base"
I can get a plot of points using plot(log(leukemia.surv$time),log(-log
(leukemia.surv$surv)), type="p"), but then I lose the functionality of
grid(). Ulimately what I want to do is overlay these plotted points
with lines generated
by various parametric survival models (dist=weibull, lognormal, etc).
All help is appreciated. Thanks in advance!
2011 Dec 03
1
partial mantel tests in ecodist with intential NA values.
...; z<-sample(1:1000,20)
> M1<-as.matrix( distance(x))
> M2 <-as.matrix( distance(y ))
> M3<-as.matrix( distance(z ))
> D1<-(lower(M1))
> D2<-(lower(M2))
> D3<-(lower(M3))
> mantel(D1 ~ D2+D3, nperm=1000)
mantelr pval1 pval2 pval3 llim.2.5% ulim.97.5%
0.09014696 0.10300000 0.89800000 0.18400000 0.01857311 0.18468621
> partial.mantel.test(M1,M2,M3,quiet=T)
$MantelR
r12 r13 r23 r12.3 r13.2
0.08977575 0.02170997 -0.01561346 0.09014696 0.02320821
$p
[1] 0.09590410 0.30769231 0.47552448 0.09490509...
2011 Jan 20
1
Problems with ecodist
Dear Dr.Goslee and anyone may intrested in matrix manipulate,
I am using your ecodist to do mantel and partial mantel test, I have
locality data and shape variation data, and the two distance matrixs are
given as belowings. When I run the analysis, it is always report that the
matrix is not square, but I didn't know what's wrong with my data. Would you
please help me on this. I am quite
2012 Jan 13
1
Problems with plotCI
Got problems with plotCI (plotrix)
I only want to plot the upper part of the error bar in my barplot
I had the exact same commands working two months ago
Now I wanted to change the legend and when I ran it again plotCI stopped
working.
To me it seems like there must some bug in R
library(plotrix)
library (graphics)
x = matrix(c( 13.75516276, 3.944604404,
2013 May 18
3
bar plot with non-zero starting level
Hi,
I want to plot grouped bars to compare 95% confidence interval estimates
from two models. Each bar represents a 95% confidence interval estimate
of a coefficient from one of the two models. Each group represents
confidence interval estimates of the same coefficient from the two models.
I think such a bar plot will nicely present whether 95% confidence
interval estimates of the same
2018 May 09
1
Adding Year-Month-Day to X axis
Helo Greg - I got it with help of your code and I would like to add the value into the boxplot chart. How to do that.
y_duration <- c (16.438, 15.321, 12.700, 12.397,
10.795, 9.928, 10.386)
On May 09, 2018, at 10:06 AM, Jayaganesh Anbuganapathy <jai6561 at icloud.com> wrote:
Actually I would like to get an output on the below snapshot. I have tried various method like points,
How to plot 2 continous variables on double y-axis with 2 factors: ggplot2, gplot, lattice, sciplot?
2013 Feb 25
3
How to plot 2 continous variables on double y-axis with 2 factors: ggplot2, gplot, lattice, sciplot?
Hi,
I have a data set with two continous variables that I want to plot MEANS (I
am not intrerested in median values) on a double-y graph. I also have 2
factors. I want the factor combinations plotted in different panes.
Dummy dataset:
mydata <- data.frame(factor1 = factor(rep(LETTERS[1:3], each = 40)),
factor2 = factor(rep(c(1:4), each = 10)),
y1 =
2012 Oct 23
2
plotting multiple variables in 1 bar graph
I'd greatly appreciate your help in making a bar graph with multiple
variables plotted on it. All the help sites I've seen so far only plot 1
variable on the y-axis
Data set:
I have 6 sites, each measured 5 times over the past year. During each
sampling time, I counted the occurrences of different benthic components
(coral, dead coral, sand, etc.) over 5 transects in each site
site
2008 Aug 05
2
TCP/IP block size
I
don't know if this is a Samba question or an OS question. I'm
working on an embedded project (microcontroller, limited RAM)
that reads files from a FreeBSD/Samba (FreeNAS) box using TCP/IP transport on port 445. They're MP3 files so they're
several MB at least. If I request 512 or 1024 bytes each time, I get
1024 bytes back from Samba every time. That's good.
But, if I