search for: trna

Hi all, I already posted this to seqinr-forum@lists.r-forge.r-project.org but since (so far) no reply was given, I decided to try my luck in this list too. Dear list. I wish (for my thesis work), to import tRNA data into R and have it aligned. My questions are: 1) What resources can I use for the data. 2) What commands might help me with the import/alignment. So far, I found two nice repositories that holds such data: 1) <http://trnadb.bioinf.uni-leipzig.de/Result> http://trnadb.bioinf.uni-leipzig...

Hello dear R help group, I would like to download the tRNA data on: http://gtrnadb.ucsc.edu/download.html And then import it into R. Can anyone direct me as to how to do so? Thanks, Tal ---------------------------------------------- My contact information: Tal Galili E-mail: Tal.Galili@gmail.com Phone number: 972-52-7275845 FaceBook: Tal Galili M...

...ettings = list(fontsize=list(text=8), superpose.polygon = list(border = 'black', col = c('white', 'gray', 'black'))), par.strip.text = list(cex=0.9), auto.key = list(space = 'top', columns = 3, cex = 0.7), # key = key.variety, # index.cond = list(c('tRNA', '5S rRNA', 'SRP RNA', 'RNase P', '16S rRNA')), # index.cond = list(rep(1,6)), # ylim = my.ylim, scales = list(x = list(rot = 45), y=list(tck = 0.4, rot = 0, relation = 'free')), ly = benchmark$Score - benchmark$Error, uy = benchmark$Score + benc...