search for: trios

I am involved in a study where, as in most of life, men demonstrate themselves to be recalcitrant. So while we have many probands and most of their mothers we only have about 50% of the trios being complete. I have been running tdt and trio.types. It appears as if it is ignoring the duos. Sometimes a duo can be informative. For instance Father ..missing Mother 1/2 Proband 1/1 This duo shows that for allele 2, this was clearly a case where 2 was untransmitted. Yet I do not think this f...

...39 5 2007 R parejas 266 6 2007 N parejas 83 7 2005 R solitarios 53 8 2005 N solitarios 1 9 2006 R solitarios 109 10 2006 N solitarios 8 11 2007 R solitarios 85 12 2007 N solitarios 34 13 2005 R trios 29 14 2005 N trios 1 15 2006 R trios 62 16 2006 N trios 19 17 2007 R trios 48 18 2007 N trios 3 How can I do this? I saw the help of the "mosaic" command, and I found that the files are like a hig-dimension...

Dear R mailing list, I have a dataset with genotypes from trios and I would like to infer haplotypes for each mother, father and child. The package that I could find that can do this is tdthap. But when the mother is homozygous (e.g., 2/2) the haplotype is called as not possible to infer (0); I would prefer for it to call the genotype (2). From what I unde...

Hello I have two similar servers, both are Debian Etch (fully updated). Both work as PDC with samba 3.0.24-6etch9. Both have squid proxy working and I am using winbind to authenticate my proxy users. Couple of days ago I've encountered a problem with authorization on one of my servers. I realized that winbind stopped working properly. wbinfo -t now gives: checking the trust secret via RPC

Good morning When I try to run an Apriori, I keep often the following message: checking subsets of size 1Error in apriori(tr, parameter = list(supp = 3e-05, conf = 0.05, minlen = 2, : internal error in trio library Other time it works fine on the same data. What can be the reason for this? -- Jolinda Bartlett Eighty20 Consulting Tel: 021 460 0440 Fax: 087 625 0649 3.1 East Wing The Palms

Hi, I usually compile R-devel tarball every few days (just to check if I can do it and check for any compile errors). As of two days ago, I am receiving the following error: ... gcc -O3 -I. -DWIN32 -D_X86_ -c xdr_mem.c -o xdr_mem.o ar crs libxdr.a xdr.o xdr_float.o xdr_stdio.o xdr_mem.o make: *** ../extra/trio: No such file or directory. Stop. make[3]: *** [rlibs] Error 1 make[2]: ***

Full_Name: Oren Cheyette Version: 2.7.2 OS: Win XP Submission from: (NULL) (64.161.123.194) Enter the following at the R command prompt: > sprintf("A %S %S %S XYZ", 1, 1, 1); Note the erroneous capitalized %S instead of %s and the numeric inputs instead of strings. With strings there's no crash - R reports bad format specifications.

When trying to compile R on Windows 10 64-bit using LTO as I always do, I encountered a segmentation fault early in the compilation. I am uncertain as to what it means (please see below for error extract). I am using the most recent version of Rtools43 (5863) and updated its libraries prior to starting the build. My EOPTS is " -march=native -pipe -mno-rtm" and my

> From: r-devel-bounces at r-project.org=20 > [mailto:r-devel-bounces at r-project.org] On Behalf Of Prof Brian Ripley > Sent: Friday, November 14, 2008 2:25 AM > To: Duncan Murdoch > Cc: R-bugs at r-project.org; ocheyett at bonddesk.com;=20 > r-devel at stat.math.ethz.ch > Subject: Re: [Rd] (PR#13283) R crashes on sprintf with bad=20 > format specification >=20 > As

But %S is not valid in C99 or POSIX, even if it is a variant in some systems. I am working on a more careful checker right now, but there will be limits to what we can catch: this was already a pretty rare example. Brian On Fri, 14 Nov 2008, William Dunlap wrote: >> From: r-devel-bounces at r-project.org >> [mailto:r-devel-bounces at r-project.org] On Behalf Of Prof Brian Ripley

Hello! I have a regular data frame (DATA) with 10 people and 1 column ('variable'). Its cases are people with names ('a', 'b', 'c', 'd', 'e', 'f', etc.). I would like to write a function that would sum up the values on 'variable' of all possible combinations of people, i.e. 1. I would like to write a loop - in such a way that it

I have a data in the following form : CIN TRN_TYP 9079954 1 9079954 2 9079954 3 9079954 4 9079954 5 9079954 4 9079954 5 9079954 6 9079954 7 9079954 8 9079954 9 9079954 9 . . . . . . there are 100 types of CIN (9079954,12441087,15246633,...) and respective TRN_TYP first of all, I want this data to be

I just read ''Mocks Aren''t Stubs'' and was intrigued by the notion of ''outside-in'' TDD. As a Rails developer, I''m curious if others are employing this method when developing Rails applications using RSpec. Is it common practice (or even practical) to drive the development of a Rails app by starting with view specs, then controller specs, then

I am using dgc.genetics to perform TDT analysis on SNP data from a cohort of trios. I now have a file with about 6008 variables. The first few variables related to the pedigree data such as the pedigree ID the person ID etc. Thereafter each variable is a specific locus or marker. The variables are named by a pattern such as "Genotype.nnnnn" with nnnnn corresponding...

On Tue, Feb 13, 2018 at 12:22 PM, Indrajit Sen Gupta <indrajitsg at gmail.com> wrote: > Hi Avraham, > > I tried with the patched version. The same error message. > > gcc -std=gnu99 -m64 -shared -s -mwindows -o R.dll R.def console.o dynload.o > editor.o embeddedR.o extra.o malloc.o opt.o pager.o preferences.o psignal.o > rhome.o rt_complete.o rui.o run.o shext.o

hi, using date_select right from a generated scaffold code leads to an error if an impossible date is selected (like the 31 of february) can''t get a way to correct this via a validation.... in fact that make sens because in the model i have the ''dateofbirth'' object which is a date object.... so providing an impossible day-month-year trio leads to an impossible

I have a trio of servers that like to reboot during high disk / network IO operations. They don't appear to panic, as I have kernel.panic = 0 in sysctl.conf. The syslog just shows normal messages, like samba complaining about browse master and then just syslogd starting up. The machines seem to crash when I'm not near the console, usually when I'm trying to pull data off them to

they say that deaths come in threes... for me, it was these: 1. scott wannberg, los angeles poet, one of my favorite performers 2. michael hart, founder of project gutenberg, icon and iconoclast 3. steve jobs, seemingly the only guy who made stuff work correctly i'm sure that for others, dennis ritchie is on their list, for his own trio: 1. c 2. k&r 3. unix godspeed to all

Help, Our server at work is down. The video memory is out. Its an old IBM PC300PL, 6892-12U, running SCO. If anyone happens to a stick of this type memory and would be willing to sell it, please let me know. Below are the requirements for the video memory: The video memory interface is controlled by an S3 TRIO 3D graphics controller. The amount of SGRAM shipped with the video subsystem is 4MB

Hello, I'm using samba as a Domain Controller, and i have the following question: It is possible to change an object's (file/dir) GROUP from Windows Explorer on a Samba server? I tried editing/changing via Security tab the unix-mapped Special Permission trio ($user, $group, Everybody) but it fails when I tried to save with the "Unable to save permission changes on <object>.