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...ng a dataset on levels of herbivory in seedlings in an experimental setup in a rainforest. I have seven classes/categories of seedling damage/herbivory that I want to analyse, modelling each separately. There are twenty maternal trees, with eight groups of seedlings around each. Each tree has a TreeID, which I use as the random effect (blocking factor). There are two fixed effects: DISTANCE - distance to maternal tree; two levels 'CLOSE' or 'AWAY' (four groups of seedlings each per tree), and PLATEAU - whether the maternal tree grows on the 'UPPER' plateau (bad soil)...

Hello, R-users,   I have a datafile with 37313 records and each record has 5 different measurements on the same variables. The format looks like this: treeID, VIG0, VIG1, VIG2, VIG3, VIG4 I was trying to convert the one row record to 5 rows record with format like this (treeID, MEASUREMENT, VIGOR). My code like this:   treeMeas<-matrix(data=0,nrow=(length(tree1$indivTree)*5), ncol=3) colnames(treeMeas)<-c("indivTree", "meas",...

...rees. The number of plots is 72. Hence we would expect 2 * 24 * 72 = 3456 data points. A few are missing, so we end up wih 3431 data points. This is what I have tried until now. #assuming independence between trees and thus ignoring the plot level. library(geepack) geeglm(formula = Y ~ Year, id = TreeID, family = binomial, corstr = "exchangeable") #using waves. But I'm wondering if this is correct. library(geepack) geeglm(formula = Y ~ Year, id = PlotID, waves = TreeID, family = binomial, corstr = "exchangeable") #using a unstructured correlation on the plot level. geeglm...

...ed measures and would like to fit with the compound symmetry correlation structure. This problem doesn't occur when using corAR1 or any of the other structures. I would greatly appreciate help on how to solve this issue. Here's my data, code lines, and error messages: > PhotoRed TreeID Block M D Time y 1 1 Dgl s1 0.5m june 2.91130232 2 1 Dgl s1 1.0m june 4.92232779 3 1 Dgl s1 2.5m june 6.17724409 4 1 Dgl s1 5.0m june 3.34278032 5 1 Dgl s1 0.5m july 6.30782170 6 1 Dgl s1 1.0m july 6.98652976 7...

Setting subvolume/snapshot readonly has been missing for a long time. With this patch, we can set a subvolume/snapshot readonly via: o btrfs subvolume set-ro <path> Signed-off-by: Liu Bo <liubo2009@cn.fujitsu.com> --- cmds-subvolume.c | 40 ++++++++++++++++++++++++++++++++++++++++ ioctl.h | 7 +++++++ 2 files changed, 47 insertions(+), 0 deletions(-) diff --git

Hi - is there an easy way to submit an object with its associations as an :expects parameter to a AWS webservice? I know I could first create a webservice method for the object, and then call - in a loop - another webservice for each of my association objects. Is there an easier more elegant way, so that I don''t have to make so many expensive webservice calls? I was thinking

Most fixes are trivial. The one from Alex is fixing a real bug that several users have reported. Alex sent the patch half a year ago and it was not yet integrated. The patch "Use /proc/mounts instead of /etc/mtab" is a repost. The patch "btrfs-receive optionally honors the end-cmd" is a preparation step to allow backup tools to multiplex a single communication stream (e.g. a

Hi All, the following patches implement the recursively snapshotting and deleting of a subvolume. To snapshot recursively you must pass the -R switch: # btrfs subvolume create sub1 Create subvolume ''./sub1'' # btrfs subvolume create sub1/sub2 Create subvolume ''sub1/sub2'' # btrfs subvolume snapshot -R sub1 sub1-snap Create a snapshot of

Hi Chris, This is the extent of my current queue of Btrfs snapshot/subvol/commit stuff. Most of these were posted several months ago. Can be sent upstream during this merge window? Not having this functionality is becoming a bit of a roadblock for our efforts to keep the Ceph data in a consistent state. These patches are also available from

This series adds an initial implementation for scrub. It works quite straightforward. The usermode issues an ioctl for each device in the fs. For each device, it enumerates the allocated device chunks. For each chunk, the contained extents are enumerated and the data checksums fetched. The extents are read sequentially and the checksums verified. If an error occurs (checksum or EIO), a good copy

Hello, This patch series adds an initial implementation of restriper (it''s a clever name for relocation framework that allows to do selective profile changing and selective balancing with some goodies like pausing/resuming and reporting progress to the user. Profile changing is global (per-FS) so far, per-subvolume profiles require some discussion and can be implemented in future.