Displaying 2 results from an estimated 2 matches for "threestep".
2010 Feb 08
1
objects masked from packages
...Name,
pData=pData(data$AffyBatch))
class(data) <- c("expSet","list")
return(data)
}
when using the workflow we have and coming to the point of preprocesswe get
the following error message:
> ex <- preprocess(ed)
Fehler in preprocess(ed) :
argument is expData threestep requires AffyBatch argument is list
threestep requires AffyBatch
I would like to know if there is a way of using both preprocess commands
without the need to rename ours. They both use different object structure as
an input and as far I understand the adventages of OOP in R it should be
able to r...
2005 Oct 18
2
Installing Bioconductor on R
...i all,
Am new to R. I am having problems installing Bioconductor package in
R on fedora core 4 running on AMD64 bit machine.
this is the error message I get :
gcc -shared -L/usr/local/lib -o affyPLM.so avg_log.o biweight.o
chipbackground.o common_types.o do_PLMrlm.o do_PLMrma.o do_PLMthreestep.o
idealmismatch.o LESN.o lm.o lm_threestep.o log_avg.o matrix_functions.o
median_logPM.o medianPM.o medianpolish.o nthLargestPM.o PLM_modelmatrix.o
preprocess.o psi_fns.o qnorm.o qnorm_probeset.o rlm_anova.o rlm.o rlm_PLM.o
rlm_se.o rlm_threestep.o rma_background2.o rma_common.o rma_PLM.o
rmaP...