search for: tacc

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2009 Feb 11
1
Table Formatting
Dear R-Users I have created the following table in R: Year TACC.SNA1 Catch.SNA1 TACC.SNA2 Catch.SNA2 TACC.SNA3 Catch.SNA3 111 1985-86 9396 18595 1860 530 1486 16727 112 1986-87 3155 12195 9506 7067 4991 2300 113 1987-88 6913...
2009 Jan 07
2
Plotting a graph for every Level of a Factor
Hello, I'm sorry if this seems similar to my last post but I thought it was significantly different to warrent a new thread. Using the dataset below, is there a way to generate a bar/line plot for the TACC/Catch of every lvl of stock? i.e. OR1,OR3,OR5. The picture at the bottom of this post is an example of the bar/line plot for OR1 which was generated when OR1 was the only stock in the table. This was created, with help from Marc Schwartz, using: > mp <- barplot(fish$TACC, space = 0, name...
2009 Jan 07
1
Bar Plot with Connected Points on 1 Y-Axis
Hi Everyone, Have created a bar plot of the data below using the following code: barplot(TACC,space=0,names.arg=Year). I now want to add a series of connected points to represent the catch. I tried to do this using line(Catch) or points(Catch), however both of these commands result in each data point being aligned with the right edge of each bar. I need them to be solid points in the cent...
2009 Jan 09
0
Graph Script/X-axis label Problem
Hi, I created the script below to plot multiple graphs. It seems to work pretty well (see BYX7) except when the max value for catch or TACC is very small. In this case the x-axis labels are removed from the x-axis (see BYX10). I can't figure out why given that y co-ordinate for the text function is par("usr")[1] - 0. Shouldn't this mean that it is flush to the x-axis? Can anyone see what is going wrong? SCRIPT:...
2013 Feb 15
1
file copy to password protected network drive
I am trying to copy files to a password protected drive which is "Ranch" at TACC from another network drive. I am logged in to the source drive and can run R there. The following code does not even find the destination folder. file.copy("sourcedrive/file.tar", " username@ranch.tacc.utexas.edu/uniqueID/destinationfolder/file.tar", overwrite = FALSE) Thanks...
2011 Sep 12
1
[LLVMdev] llvm-gfortran problems
...erated. Ashay On Mon, Sep 12, 2011 at 4:12 PM, Dmitry N. Mikushin <maemarcus at gmail.com>wrote: > I see. And what's the purpose for outputting bitcode into *.o and *.a > files? Do you want to perform an LLVM pass on linking step? > > 2011/9/13 Ashay Rane <ashay.rane at tacc.utexas.edu>: > > Hmm.. I didn't explain the problem completely last time. I am creating a > > drop-in replacement for gcc and gfortran that runs an additional pass on > the > > bitcode before generating the native binary. Here's whats happening: If > the > >...
2011 Sep 12
2
[LLVMdev] llvm-gfortran problems
...: > Sorry, at what step do you need archive? llc emits binary, it does not > perform any linking, thus it does not need anything except the input > bytecode file. Then during linking you can link whatever archives of > binaries you want. > > 2011/9/13 Ashay Rane <ashay.rane at tacc.utexas.edu>: > > Thats correct. But using llc becomes a problem when I have archives (.a > > files). I could, in theory, extract its contents to a tempdir and then > use > > llc and link but just wondering if there is a more elegant solution. > > Ashay > > > &...
2011 Sep 12
0
[LLVMdev] llvm-gfortran problems
I see. And what's the purpose for outputting bitcode into *.o and *.a files? Do you want to perform an LLVM pass on linking step? 2011/9/13 Ashay Rane <ashay.rane at tacc.utexas.edu>: > Hmm.. I didn't explain the problem completely last time. I am creating a > drop-in replacement for gcc and gfortran that runs an additional pass on the > bitcode before generating the native binary. Here's whats happening: If the > source code compilation proce...
2011 Sep 12
2
[LLVMdev] llvm-gfortran problems
...emarcus at gmail.com>wrote: > Ashay, > > If I understand correctly, in hw.o you would have llvm bytecode, while > linker expects regular object binary. Probably first you need to emit > asm out of bytecode using llc? > > - D. > > 2011/9/12 Ashay Rane <ashay.rane at tacc.utexas.edu>: > > Hello, > > Sorry for the late reply. Using dragonegg worked well, thanks all! > > Just as a note... I had to use llvm-ld during the link step because > gfortran > > could not link bitcode. Here's an example of the error shown when using > > g...
2011 Sep 12
0
[LLVMdev] llvm-gfortran problems
Sorry, at what step do you need archive? llc emits binary, it does not perform any linking, thus it does not need anything except the input bytecode file. Then during linking you can link whatever archives of binaries you want. 2011/9/13 Ashay Rane <ashay.rane at tacc.utexas.edu>: > Thats correct. But using llc becomes a problem when I have archives (.a > files). I could, in theory, extract its contents to a tempdir and then use > llc and link but just wondering if there is a more elegant solution. > Ashay > > On Mon, Sep 12, 2011 at 3:00 PM...
2009 Mar 22
5
If statement generates two outputs
Hi, How do I tell an if statement to generate two seperate outputs. E.g If X>5 I want to create df1 and df2: if (X>5) {df1<-c(4,5,6,7,8) AND df2<-c(9,10,11,12,13)} Thanks, James -- View this message in context: http://www.nabble.com/If-statement-generates-two-outputs-tp22650844p22650844.html Sent from the R help mailing list archive at Nabble.com.
2011 Aug 31
0
[LLVMdev] llvm-gfortran problems
...ran that is based on gcc 4.2? Since that, DragonEgg has been introduced - a powerful plugin to gcc that makes it possible to utilize regular gcc compilers as frontends to llvm: http://dragonegg.llvm.org/ It generates Fortran90 programs for me very well. - D. 2011/9/1 Ashay Rane <ashay.rane at tacc.utexas.edu>: > Hello, > I have been trying to compile a few small programs > [http://www.esm.psu.edu/~ajm138/fortranexamples.html] using llvm-gfortran. > Since I run my own pass on the generated bitcode, I have had to split the > compilation process into using llvm-gfortran, opt a...
2011 Sep 12
0
[LLVMdev] llvm-gfortran problems
Ashay, If I understand correctly, in hw.o you would have llvm bytecode, while linker expects regular object binary. Probably first you need to emit asm out of bytecode using llc? - D. 2011/9/12 Ashay Rane <ashay.rane at tacc.utexas.edu>: > Hello, > Sorry for the late reply. Using dragonegg worked well, thanks all! > Just as a note... I had to use llvm-ld during the link step because gfortran > could not link bitcode. Here's an example of the error shown when using > gfortran instead of llvm-ld: &g...
2011 Aug 31
4
[LLVMdev] llvm-gfortran problems
Hello, I have been trying to compile a few small programs [ http://www.esm.psu.edu/~ajm138/fortranexamples.html] using llvm-gfortran. Since I run my own pass on the generated bitcode, I have had to split the compilation process into using llvm-gfortran, opt and then llvm-ld (for linking, as I do with C/C++ programs). For now, I'll drop the `opt' statement. Here's what I see while
2011 Sep 12
3
[LLVMdev] llvm-gfortran problems
Hello, Sorry for the late reply. Using dragonegg worked well, thanks all! Just as a note... I had to use llvm-ld during the link step because gfortran could not link bitcode. Here's an example of the error shown when using gfortran instead of llvm-ld: $ ${GCC_4_5_0}/bin/gfortran hw.f -c -fplugin=${DRAGONEGG_PLUGIN}/dragonegg.so -o hw.o -flto -emit-llvm -S $ ${LLVM_2_9}/bin/opt -mem2reg hw.o
2011 Feb 26
2
GotoBLAS2 breaks lapack
Hi, I'm relatively new to R on Ubuntu (moving from Windows), and I'm trying to get GotoBLAS2 working. I installed (from a CRAN mirror) the pre-built binaries of R (which, as far as I know, is compiled as a shared library) on Ubuntu 10.10 using apt-get install r-base r-base-dev I successfully built GotoBLAS2 from source, copied the library to /usr/lib and created s symbolic link from
2010 Jun 30
5
Possible feature request: sync_on_close mode for scp/sftp uploads
Hi all, First, my apologies if this is not the right forum for this... if there is a more appropriate place to make OpenSSH feature requests, or if this feature already exists, please let me know. Some background: My company makes an 'embedded' audio server box that runs Debian Linux, and one of the product's features is that users can upload files to the server via SSH, using their
2009 Mar 03
0
Two Column-group names using Latex(Hmisc)
...est, file="C:/Documents and Settings/darej/My Documents/James/READY.tex", title = "", rowname = NULL, cgroup = c("Fishstock", stocknames), n.cgroup = c(1, rep(2,nostocks)), colheads = c("Year", rep(c("Catch", "TACC"), nostocks),landscape=TRUE)) Is there a way to add another row of column group names (see QMA's row in "desired.pdf"). Thanks for your help. Regards, James http://www.nabble.com/file/p22300716/original.pdf original.pdf http://www.nabble.com/file/p22300716/desired.pdf desire...
2009 Mar 29
1
Two variables on one lattice barchart
Hi, I created the barchart below using the lattice package, however I can't seem to find a way to add another variable as a line (see the desired square/lines that I drew for the last 10 years of the plot). Can anyone help me with this? Your help is much appreciated! Code: Schart<-barchart(Catch~Year,data=SNA, scales=list(col = "black", tck = c(1, 0),x=list(rot=45)))
2005 Nov 14
0
optimized BLAS
As a few of you will know, Dr Goto's BLAS is now available again (http://www.tacc.utexas.edu/resources/software/software.php), but only for academic use and only for Linux (at least in binary form, and source-code licenses are not yet available). http://www.netlib.org/lapack pointed me to AMD's ACML (http://www.amd.com/acml). This has a less restrictive licence, and see...