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t1s
2010 Dec 09
1
Statistics of count data for differential expression
...I also have Chip-Seq read count data
from a "control / wild type (C)" experiment. I have 3 replicates (2
technical, 1 biological) of each of these. What is the best way to go for a
differential expression between T1 and T2? Is it best to just go straight
between T1 and T2 or is it to do a T1vsC and T2vsC and then compare the
results from these for diff expr? What do you think is better and why? I
appreciate your thoughts on this.
Sincerely,
Vishal
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