search for: summarizedexperi

Displaying 4 results from an estimated 4 matches for "summarizedexperi".

2018 Sep 18
2
Suggested Patch: Adding commas to list of packages after R CMD check
...tension type ... Package * this is package 'glmSparseNet' version '0.99.13' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... ERROR Packages required but not available: 'MultiAssayExperiment' 'glmnet' 'SummarizedExperiment' 'STRINGdb' 'biomaRt' 'futile.logger' 'sparsebn' 'sparsebnUtils' 'forcats' 'dplyr' 'readr' 'ggplot2' 'ggfortify' 'reshape2' 'rlang' 'loose.rock' Packages suggested but not available:...
2018 Sep 18
0
Suggested Patch: Adding commas to list of packages after R CMD check
...this is package 'glmSparseNet' version '0.99.13' > * package encoding: UTF-8 > * checking package namespace information ... OK > * checking package dependencies ... ERROR > Packages required but not available: > 'MultiAssayExperiment' 'glmnet' 'SummarizedExperiment' 'STRINGdb' > 'biomaRt' 'futile.logger' 'sparsebn' 'sparsebnUtils' 'forcats' > 'dplyr' 'readr' 'ggplot2' 'ggfortify' 'reshape2' 'rlang' 'loose.rock' > > Packages sugges...
2018 Mar 21
0
Error in GDCprepare step of TCGAbiolinks
...workflow.type = "HTSeq - Counts", experimental.strategy = "RNA-Seq") query_load <- GDCdownload(query.exp) luad.exp <- GDCprepare(query = query.exp, save = TRUE, save.filename = "TCGA_LUAD_Exp.rda", summarizedExperiment = TRUE) |==================================================================================================| 100% 1 MB |==================================================================================================| 100% 1 MB |=========================================================...
2019 Jul 04
2
Fwd: Fedora 31 System-Wide change proposal: Automatic R runtime dependencies
...t * R-S4Vectors * R-sandwich * R-scales * R-scatterplot3d * R-sciplot * R-selectr * R-sessioninfo * R-sfsmisc * R-shiny * R-showtext * R-showtextdb * R-simmer * R-snow * R-sodium * R-sourcetools * R-sp * R-spelling * R-statmod * R-statnet.common * R-stringdist * R-stringi * R-stringr * R-styler * R-SummarizedExperiment * R-svglite * R-sys * R-sysfonts * R-systemfit * R-testit * R-testthat * R-tibble * R-tidyr * R-tidyselect * R-tikzDevice * R-timeDate * R-timeSeries * R-tinytest * R-tinytex * R-tkrplot * R-tkWidgets * R-tufte * R-tweenr * R-udunits2 * R-unitizer * R-units * R-unix * R-usethis * R-utf8 * R-uui...