search for: stddev

Displaying 20 results from an estimated 328 matches for "stddev".

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2010 Aug 08
0
[LLVMdev] MmapAllocator
...little performance impact in > either direction, so that's good: > > ### 2to3 ### > 35.590589 -> 35.824554: 1.0066x slower > > ### bzr_startup ### > Min: 0.157976 -> 0.155976: 1.0128x faster > Avg: 0.167575 -> 0.168924: 1.0081x slower > Not significant > Stddev: 0.00334 -> 0.00716: 2.1463x larger > Timeline: http://tinyurl.com/39thymp > > ### call_method ### > Min: 0.878663 -> 0.884666: 1.0068x slower > Avg: 0.887148 -> 0.888667: 1.0017x slower > Not significant > Stddev: 0.02062 -> 0.02074: 1.0058x larger > Timeline:...
2010 Aug 08
4
[LLVMdev] MmapAllocator
...ed tests. It seems using mmap()/munmap() has very little performance impact in either direction, so that's good: ### 2to3 ### 35.590589 -> 35.824554: 1.0066x slower ### bzr_startup ### Min: 0.157976 -> 0.155976: 1.0128x faster Avg: 0.167575 -> 0.168924: 1.0081x slower Not significant Stddev: 0.00334 -> 0.00716: 2.1463x larger Timeline: http://tinyurl.com/39thymp ### call_method ### Min: 0.878663 -> 0.884666: 1.0068x slower Avg: 0.887148 -> 0.888667: 1.0017x slower Not significant Stddev: 0.02062 -> 0.02074: 1.0058x larger Timeline: http://tinyurl.com/2fm39l2 ### call_met...
2008 Jul 24
5
printa stddev error
Hi, Searched for similar errors and nothing came up. Anybody know what this is? When using aggregate stddev, and then trying to print it at END, using printa, I get this error: dtrace: processing aborted: Invalid return value from callback avg works fine. Tried on two recent builds of solaris (build 89 and build 94), on two difference sparc systems. Here''s a sample script: #!/usr/sbin/dtrace -F...
2013 Jun 24
5
[LLVMdev] [LNT] Question about results reliability in LNT infrustructure
...n we compare two testings, each of which is run with three samples, how would LNT show whether the comparison is reliable or not? I have seen that the function get_value_status in reporting/analysis.py uses a very simple algorithm to infer data status. For example, if abs(self.delta) <= (self.stddev * confidence_interval), then the data status is set as UNCHANGED. However, it is obviously not enough. For example, assuming both self.delta (e.g. 60%) and self.stddev (e.g. 50%) are huge, but self.delta is slightly larger than self.stddev, LNT will report to readers that the performance improveme...
2011 Jun 08
1
using stimulate(model) for parametric bootstrapping in lmer repeatabilities
...dual level for consistency analysis, A-D are other fixed and random effects that I have to control for. Following Nakagawa and Scheilzeth I can work out the repeatability estimate using the following (as it is a binomial and the residual variance is fixed at 1). attr(lme4::VarCorr(model)$E, "stddev")^2 / (1*(pi^2)/3 + attr(lme4::VarCorr(model)$E, "stddev")^2 + attr(lme4::VarCorr(model)$C, "stddev")^2 + attr(lme4::VarCorr(model)$D, "stddev")^2 ) My question is can I use stimulate(model) to generate values that I can then use to do parametric bootstrap ana...
2005 May 05
6
Need some quick help with lattice - barchart
...s.data.frame(t(structure(c( 1,2005,9.24,6.18,634, 2,2005,8.65,6.05,96, 8,2004,6.81,6.51,16, 9,2004,9.0,7.29,8, 10,2004,8.84,6.18,524, 11,2004,8.54,6.35,579, 12,2004,9.97,6.3,614, 12,2005,8.75,5.84,32, ), .Dim=c(5,8)))) colnames(testdata) <- c('month', 'year', 'mean','stdDev','miceCount') testdata$month <- as.numeric(testdata$month) testdata$year <- factor(testdata$year) testdata <- testdata[do.call("order", testdata), ] png('lexstar_3241.png', width=600, height=as.numeric(length(levels(testdata$year))*200), pointsize=8) trellis....
2011 Jan 19
2
VarCorr
I have a loop that I would like to use to extract the "stddev" for each itteration so I can average the "stddev" for all the runs. It would be helpful to know how to extract the "stddev" for each run from the VarCorr. Thanks MCruns<-1000 sighatlvec<-rep(NA,MCruns) sighatbvec<-rep(NA,MCruns) sighatevec<-rep(NA,MCruns) for...
2013 Jun 27
0
[LLVMdev] [LNT] Question about results reliability in LNT infrustructure
...two testings, each of which is run with three samples, how would LNT show whether the comparison is reliable or not? > > > I have seen that the function get_value_status in reporting/analysis.py uses a very simple algorithm to infer data status. For example, if abs(self.delta) <= (self.stddev * confidence_interval), then the data status is set as UNCHANGED. However, it is obviously not enough. For example, assuming both self.delta (e.g. 60%) and self.stddev (e.g. 50%) are huge, but self.delta is slightly larger than self.stddev, LNT will report to readers that the performance improveme...
2006 Jul 03
1
gamm
...ly the intercept that is changing? And where can I find some explanation on the magic output below? Thanks Piet summary(b2$lme) Random effects: Formula: ~Xr.1 - 1 | g.1 Structure: pdIdnot Xr.11 Xr.12 Xr.13 Xr.14 Xr.15 Xr.16 Xr.17 Xr.18 StdDev: 1.680679 1.680679 1.680679 1.680679 1.680679 1.680679 1.680679 1.680679 Formula: ~Xr.2 - 1 | g.2 %in% g.1 Structure: pdIdnot Xr.21 Xr.22 Xr.23 Xr.24 Xr.25 Xr.26 Xr.27 Xr.28 StdDev: 1.57598 1.57598 1.57598 1.57598 1.57598 1.57598 1.57598 1.57598 Formula: ~Xr.3 - 1 | g...
2009 Aug 17
3
Newbie question re stddev, quantmod and performanceanalytics
...trying to calculate the std dev of returns of YHOO so far i got: getSymbols("YHOO") retYHOO <- Return.calculate(Cl(YHOO)) > sd(retYHOO) YHOO.Close NA but i received an NA....can any assist? tks! -- View this message in context: http://www.nabble.com/Newbie-question-re-stddev%2C-quantmod-and-performanceanalytics-tp25001293p25001293.html Sent from the R help mailing list archive at Nabble.com.
2013 Jul 01
0
[LLVMdev] [LNT] Question about results reliability in LNT infrustructure
...two testings, each of which is run with three samples, how would LNT show whether the comparison is reliable or not? > > > I have seen that the function get_value_status in reporting/analysis.py uses a very simple algorithm to infer data status. For example, if abs(self.delta) <= (self.stddev * confidence_interval), then the data status is set as UNCHANGED. However, it is obviously not enough. For example, assuming both self.delta (e.g. 60%) and self.stddev (e.g. 50%) are huge, but self.delta is slightly larger than self.stddev, LNT will report to readers that the performance improveme...
2018 Sep 20
2
Vectorization width not correct using #pragma clang loop vectorize_width
...th(32) but i m getting width 8 for the following kernel; #define M 128 #define N 128 #define SQRT_FUN(x) sqrtf(x) int main(int argc, char** argv) { /* Variable declaration/allocation. */ double float_n = (double)N; double data[N*M]; double corr[M*M]; double mean[M]; double stddev[M]; uint32_t i,j,k; /*Initialize array(s). */ #pragma clang loop vectorize_width(1) //no vectorize for (i = 0; i < N*M; i++) { data[i] = (50.0)*i; } kernel_1: #pragma clang loop vectorize_width(32) for (j = 0; j < M; j++) { mean[j] = 0.0;...
2012 Mar 21
1
AIC models are not all fitted to the same number of observation
...) Both have the same number of observations and groups: lmez6 Linear mixed-effects model fit by REML Data: ika_z6_test Log-restricted-likelihood: -2267.756 Fixed: lepus ~ vulpes (Intercept) vulpes 1.35017117 0.04722338 Random effects: Formula: ~1 | troncon (Intercept) StdDev: 0.8080261 Formula: ~1 | an %in% troncon (Intercept) Residual StdDev: 1.086611 0.4440076 Number of Observations: 1350 Number of Groups: troncon an %in% troncon 169 1350 > lmez60 Linear mixed-effects model fit by REML Data: ika_z6_test...
2009 Mar 05
1
[PATCH] OCFS2: Pagecache usage optimization on OCFS2
...time taken by event execution: 989.1867 per-request statistics: min: 0.0000s avg: 0.0066s max: 0.4400s approx. 95 percentile: 0.0417s Threads fairness: events (avg/stddev): 9375.0000/257.65 execution time (avg/stddev): 61.8242/0.01 -2.6.29-rc7-patched Test execution summary: total time: 71.9416s total number of events: 150000 total time taken by event execution: 845.7592 per-request statistics:...
2001 Nov 14
2
lme: how to extract the variance components?
Dear all, Here is the question: For example, using the "petrol" data offered with R. pet3.lme<-lme(Y~SG+VP+V10+EP,random=~1|No,data=petrol) pet3.lme$sigma gives the residual StdDev. But I can't figure out how to extract the "(intercept) StdDev", although it is in the print out if I do "summary(pet3.lme)". In S-plus3.4 , $var.ran is the estimate of the variance of the random effects between clusters. what is the equivalent thi...
2007 Nov 27
2
lme object manipulation
...REML Data: dat Log-restricted-likelihood: 22.3213 Fixed: express1 ~ race * thaps + race * tuni (Intercept) race thaps tuni race:thaps race:tuni 7.00034057 -0.02675202 -0.05687972 0.01265845 -0.03859781 -0.11248439 Random effects: Formula: ~1 | fam (Intercept) StdDev: 0.1131353 Formula: ~1 | twin %in% fam (Intercept) StdDev: 0.1740635 Formula: ~1 | thaw %in% twin %in% fam (Intercept) Residual StdDev: 0.1177579 0.1182267 Variance function: Structure: Different standard deviations per stratum Formula: ~1 | race Parameter estimates:...
2003 Mar 21
2
Trying to make a nested lme analysis
...to make this analysis using lme. > model <- lme(Glycogen~Treatment, random=~1|Treatment/Rat/Liver) > summary(model) Linear mixed-effects model fit by REML Data: NULL AIC BIC logLik 233.6213 244.0968 -109.8106 Random effects: Formula: ~1 | Treatment (Intercept) StdDev: 3.541272 Formula: ~1 | Rat %in% Treatment (Intercept) StdDev: 6.00658 Formula: ~1 | Liver %in% Rat %in% Treatment (Intercept) Residual StdDev: 3.764883 4.600247 Fixed effects: Glycogen ~ Treatment Error in if (any(wchLv <- (as.double(levels(xtTab[, wchPval])) ==...
2007 Feb 25
1
nested design in lme, need help with specifying model
...-lme(Escape.parameter~Species, random=~1|Species/Replicate) as I am interested in Species as fixed effects and want to know variability caused by Replicates nested within Species as random effects. However, when running this model, I get Random effects: Formula: ~1 | Species (Intercept) StdDev: 2.937479 Formula: ~1 | Replicate %in% Species (Intercept) Residual StdDev: 4.973931 4.266302 Fixed effects: Max_speed ~ Species Value Std.Error DF t-value p-value (Intercept) 23.792040 4.798143 39 4.958593 0 Spec2 -7.121766 6.747930 0 -1.05...
2003 Dec 10
0
nested analysis with lme - odd result?
...factor(F3f)) v <- as.numeric(VarCorr(y.lme)[,2]) v <- as.numeric(na.omit(v)) F1V <- c(F1V,v[1]) F2V <- c(F2V,v[2]) F3V <- c(F3V,v[3]) residV <- c(residV,y.lme$sigma) } var.df <- data.frame(F1V,F2V,F3V,residV) par(mfrow=c(2,2)) hist(var.df$F1V,main='Level 1 StdDev') hist(var.df$F2V,main='Level 2 StdDev') hist(var.df$F3V,main='Level 3 StdDev') hist(var.df$residV,main='Residual StdDev') txt <- 'Simulated stddev:' for (i in 1:length(simVar)) { txt <- paste(txt,' level ',i,'=',simVar[i],',',sep...
2011 Mar 26
0
NetCDF - rolling means and StdDev
Hello, I am trying to come up with a routine to calculate a rolling mean and standard deviation for three parameters stored in a NetCDF file. The NetCDF file contains 10 years of daily records for each of the three parameters, and I need the statistics for each of the three parameters. Below I include some code illustrating what I've done so far. Obviously this approach does not get at the